MXO02081.3prime Sequence
600 bp (600 high quality bases) assembled on 2007-01-18
> MXO02081.3prime
ATGGTCTAGAAAGCTTGCATCCTTGGGCGGCACATCCTTGCTCAACTCTG
CACGCTTCCTCTGCTCCATGCGCTCCTCTACCTGGTCCAAGCGCTCGCTC
ATGGCATCCAGGGAGCTCAGCAGTCCCGCCTGGATCTCGCCATATCGCTT
CATGGCCAGGACCAGACTCTCCTCGATAAGTTCGCTCTGCTGCGCGTACT
CCCCGTTGTTCTGCGTTATGCCCTTTAGCTGCTCCAGACACTCGGCGGGA
ATGCTGCGGAAGTACTCCGCGCCCAGGGCCGGTTCCAGCTGCTTAATCCT
CTCCAGCTGCTCGGCCTGCGTGTGCAGCTCGGGGGCCACGGCTTGCAGGT
ACACCTCCTTGGAGCGCACCTGCTGGTGCTCCTCCAGGAAGTTGGGGTCC
AGGTACTTCTCCAGCTCGTCAGATCTCTTCACGCACTGCTGCAGTGCAGC
ACTTCCTGTGGTTGCTTCGCCCAGGATGGCGTGTGCCGAGCACAGGGCGT
CGACCACGCCCTCGCCCACCTCAGAGTCCTGGACCGGACCCAGGACTCGT
GTCAGGGCATCGATGCGCTTCTCCAGAATGTCCAGTGCCTCCATGTCGAC
MXO02081.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:02:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9893-PA | 579 | l(2)06496-RA | 1..576 | 594..19 | 2880 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:44:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)06496-RB | 1086 | CG9893-RB | 84..659 | 594..19 | 2880 | 100 | Minus |
| l(2)06496-RA | 1174 | CG9893-RA | 84..659 | 594..19 | 2880 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:44:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23061935..23062510 | 19..594 | 2880 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:44:13 has no hits.
MXO02081.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:06 Download gff for
MXO02081.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9893-PA | 1..579 | 16..594 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:28 Download gff for
MXO02081.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)06496-RA | 77..664 | 13..600 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:26 Download gff for
MXO02081.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)06496-RA | 77..664 | 13..600 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:26 Download gff for
MXO02081.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23061930..23062515 | 13..600 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:28 Download gff for
MXO02081.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18949453..18950038 | 13..600 | 98 | | Plus |
MXO02081.5prime Sequence
853 bp (750 high quality bases) assembled on 2007-04-03
> MXO02081.5prime
GCGGCCGCGACGTCCACATATACCTGCCGTTCACTATTATTTAGTGAAAT
GAGATATTATGATATTTTCTGAATTGTGATTAAAAAGGCAACTTTATGCC
CATGCAACAGAAACTATAAAAAATACAGAGAATGAAAAGAAACAGATAGA
TTTTTTAGTTCTTTAGGCCCGTAGTCTGCAAATCCTTTTATGATTTTCTA
TCAAACAAAAGAGGAAAATAGACCAGTTGCAATCCAAACGAGAGTCTAAT
AGAATGAGGTCGAAAAGTAAATCGCGCGGGTTTGTTACTGATAAAGCAGG
CAAGACCTAAAATGTGTAAAGGGCAAAGTGTATACTTTGGCGTCACCCCT
TACATATTTTAGGTCTTTTTTTATTGTGCGTAACTAACTTGCCATCTTCA
AACAGGAGGGCTGGAAGAAGCAGACCGCTAACACAGTACATAAAAAAGGA
GACATGAACGATGAACATCAAAAAGTTTGCAAAACAAGCAACAGTATTAA
CCTTTACTACCGCACTGCTGGCAGGAGGCGCAACTCAAGCGTTTGCGAAA
GAAACGAACCAAAAGCCATATAAGGAAACATACGGCATTTCCCATATTAC
ACGCCATGATATGCTGCAAATCCCTGAACAGCAAAAAAATGAAAAATATA
AAGTTCCTGAGTTCGATTCGTCCACAATTAAAAATATCTCTTCTGCAAAA
GGCCTGGACGTTTGGGACAGCTGGCCATTACAAAACACTGACGGCACTGT
CGCAAACTATCACGGCTACCACATCGTCTTTGCATTAGCCGGAGATCCTA
AAAATGCGGATGACACATCGATTTACATGTTCTATCAAAAAGTCGGCGAA
ACT
MXO02081.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-11 12:08:54 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 19:14:32 has no hits.
Blast to na_all.dmel.RELEASE6 performed on 2014-11-28 19:14:30 has no hits.
Blast to na_te.dros performed on 2014-11-28 19:14:31 has no hits.
MXO02081.5prime Sim4 Records
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 19:43:57 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 19:43:57 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 22:27:26 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 22:27:26 has no hits.
