MXO02089.5prime Sequence
717 bp (717 high quality bases) assembled on 2007-04-04
> MXO02089.5prime
CAGTCGACATGAGCAATCTGCTGAATTTTGCCCTGCGGCAGGGCGTCAAC
TCCATCAAGCGCCTTAGCCTCCAGAGTTTCAGACTGGCAGCTCCGGCCAT
TGTAACAAAAACGCCGGTTACTTCCACGATAAAGAGATTCTCCTCCCAAG
CCGCCCCCTTCGATGTGAACACCAGTGTCCCCAAGGACATAATACTTTTC
AAGTATGAAAACCCCCGATTCTACCAGATGCTTAACTTTTTCGGGGTGTG
TCAGTTTGTTTTCTGGACATATCTCTCGCACTTCGCCTTCACGACGCTTA
AGGATGCTCCAGTGGTGGAAAAACCCGGAGAGGAGCTGAAGTGGTTCCAG
CGCATAAATCTGGGCGATAATAAGTACAGAAATGGCATTACAGCCTGTAG
CTTTCTGATAGGATATGGCATACTGTTTGCTGTCTGGATGTTTACCCTGC
GATCGGTGCGTTTTCTTATCTTGAGAAAGGGTGGTCAGAGCGTTTCCTTT
GTGACCTACGGTCCCTTCAACCGGAATCGCATTATGACCGTGCCATTAAA
GTGCGTCTCCGCCGAGGAATCACGGAACATGGCCAGGGTGCAGCTACCCA
TTAAGGTGAAGGGCAAGACACTGTATTACGTCCTGGATATGCGTGGCGAG
TTTCGGAATGGCGAGTTATTCGATTACACGGCGGGCCTCAAGCGTCGCAT
TGCAAGCTTTCTAGACC
MXO02089.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-11 12:09:02 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:08:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12935-RB | 918 | CG12935-RB | 111..803 | 9..701 | 3465 | 100 | Plus |
| CG12935-RA | 1200 | CG12935-RA | 393..1085 | 9..701 | 3465 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:08:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10809789..10810192 | 9..412 | 2020 | 100 | Plus |
| 2R | 25286936 | 2R | 10810248..10810540 | 409..701 | 1465 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:08:56 has no hits.
MXO02089.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:52:56 Download gff for
MXO02089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12935-RA | 385..1090 | 1..706 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:51:05 Download gff for
MXO02089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12935-RA | 385..1090 | 1..706 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:51:05 Download gff for
MXO02089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10809781..10810191 | 1..411 | 99 | -> | Plus |
| 2R | 10810251..10810545 | 412..706 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:52:56 Download gff for
MXO02089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6697286..6697696 | 1..411 | 99 | -> | Plus |
| arm_2R | 6697756..6698050 | 412..706 | 99 | | Plus |
