MXO02090.3prime Sequence
771 bp (760 high quality bases) assembled on 2007-01-18
> MXO02090.3prime
ATGGTCTAGAAAGCTTGCCTTGGTCGCGTCTAGTTTGGCTAGGCCGTCGG
CATATTGGAACTCCGGACTGTTCTCGTACTCGCACATGTCCAGGGCGATG
ACGCAGCTCTCCTTGACCACGCGCTTGTCGTCCTCGGCGTAGCGGTTCAA
GATCTGAATGCAGTCCTCTGTGGCGATGGCGCCAAGGGCCTCGGCACACT
CGTGACGCACCATTTCGTTTTCCAGGCGATCCTCCAGATTCTCTTGAAGG
AAGGGAATGCTGCAGGGTTCTTGCAGCTGGCCCAGTACGAAGGCCACCTC
GTGGCGGAAGAGGGCGGAAGAGTCCTTAAGTCCCTCGGCAATGGCCAAGA
CACTCTCTTCGGTGCGCAGATTGCGCAGGCTGAACATGGCCCTATATCGA
TCGAACAGGCTCTGCTGGGCATCCAGATAGATGGCCTTCAGCTCGGTGAC
GCTCTTGTCGCCCGCAGTTGGCGGTGAGGGATCAACGGAGGCGTAAGGGT
TGCTGTCATCTACCTTTTGGCCACTCTGCAGCCAGCGGACGCGGTCCAGA
GCAATGGCACATGTTTCGCCCACCTCCACTACCGGATCTTGTTTGTACTC
CTCCAGAATTGGCAGCACATCTGGATGACCAATGGCGCCCATGGCCTCCG
CAGCCTCGTGGCGCACCATCGGCTCCTGGGTGGTGTCCTTTAGCACCTTG
GTGAGGATGTCTAACGCCTGTGCGTCCTGCATCTGACCCAAGCAGTAGGC
CAGCTCATGTTTGAGAAGGGC
MXO02090.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:02:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2245-PA | 909 | l(3)s1921-RA | 154..906 | 771..19 | 3740 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:31:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
nero-RA | 1114 | CG2245-RA | 237..989 | 771..19 | 3750 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:31:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 31746570..31747322 | 19..771 | 3750 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:31:16 has no hits.
MXO02090.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:10 Download gff for
MXO02090.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2245-PA | 154..909 | 16..771 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:35:39 Download gff for
MXO02090.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
nero-RA | 237..989 | 19..771 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:25:10 Download gff for
MXO02090.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
nero-RA | 237..989 | 19..771 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:25:10 Download gff for
MXO02090.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 31746570..31747322 | 19..771 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:35:39 Download gff for
MXO02090.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 27572292..27573044 | 19..771 | 99 | | Plus |
MXO02090.5prime Sequence
732 bp (603 high quality bases) assembled on 2007-04-02
> MXO02090.5prime
CAGTCGACATGGTTTCGCAGCAGCAAATCGAGGCCATTGGAGGCGTTCTG
AACAACAAGGAACGCCCACTGAAAGAGCGCTTTCGAGCCCTCTTCACGCT
GAAGAACATCGGCGGAGGAGCGGCCATCGAGGCGATCAGCAAAGCCTTTG
ACGATGATTCGGCCCTTCTCAAACATGAGCTGGCCTACTGCTTGGGTCAG
ATGCAGGACGCACAGGCGTTAGACATCCTCACCAAGGTGCTAAAGGACAC
CACCCAGGAGCCGATGGTGCGCCACGAGGCTGCGGAGGCCATGGGCGCCA
TTGGTCATCCAGATGTGCTGCCAATTCTGGAGGAGTACAAACAAGATCCG
GTAGTGGAGGTGGCCGAAACATGTGCCATTGCTCTGGACCGCGTCCGCTG
GCTGCAGAGTGGCCAAAAGGTAGATGACAGCAACCCTTACGCCTCCGTTG
ATCCCTCACCGCCAACTGCGGGCGACAAGAGCGTCACCGAGCTGAAGGCC
ATCTATCTGGATGCCCAGCAGAGCCTGTTCGATCGATATAGGGCCATGTT
CAGCCTGCGCAATCTGCGCACCGAAGAGAGTGTCTTGGCCATTGCCGAGG
GACTTATGGACTCTTCCGCCCTCTTCCGCCACGAGGTGGCCTTCGTACTG
GGCCAGCTGCAAGAACCCTGCAGCATTCCCTTCCTTCAAGAGAATCTGGA
GGATCGCCTGAAAAACGAAATGGTGCGTCACG
MXO02090.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:09:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2245-PA | 909 | l(3)s1921-RA | 1..724 | 9..732 | 3570 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
nero-RA | 1114 | CG2245-RA | 84..807 | 9..732 | 3590 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 31746752..31747475 | 732..9 | 3590 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:04:40 has no hits.
MXO02090.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:10 Download gff for
MXO02090.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2245-PA | 1..724 | 9..732 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:53:29 Download gff for
MXO02090.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
nero-RA | 77..807 | 1..732 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:40:47 Download gff for
MXO02090.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
nero-RA | 77..807 | 1..732 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:40:47 Download gff for
MXO02090.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 31746752..31747482 | 1..732 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:53:29 Download gff for
MXO02090.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 27572474..27573204 | 1..732 | 99 | | Minus |