MXO02092.5prime Sequence
799 bp (769 high quality bases) assembled on 2007-04-02
> MXO02092.5prime
CAGTCGACATGACCAGGAAAAAGGCTCCTAAGAAAAAAACAGAGGTTGTA
TTCGACAACAAGAAACGCATAGAGTTTCTCAGTGGCTTCCGGAAAAGAAA
GAATGAGCGACGATCGCGTGCAAAGGCGGATCTGGAAAGAAACCTTAAGA
ACGAGCGCAAGCGCATACGGCAGGAGGTAAAGGATGGCTTTAACCACCTG
AAGAAATCCTTCGAACCGCTGCGCGAGCTCACCGAGGAGGACAAGGCCGA
GGAGGCGGAGCAGCAGCAGGAGGAGACCTACGAAGATGATGAAGTGCAGG
TGAAGATCGTGGAGCTGACCACCAACGATCTGGCCGCCAAGCGCAATATG
TTGGGTGCCAACACGGCAGAGGAAAGCGAACCGGAGGAGCAGGCTGACCA
GAGCGAGGAGGACGAAGCCGACCAGGCCAATAGGATACCCGGCATGGATT
TCGATCCCAACGCCCGCAAACGTAAACCCAAGCCGGAGGACGAAGAGGAG
CCGAAGGCCACAAAGTCCAACAACTCCACGCTGCCGGACATCAAGAGCAA
AAAGGATCTCGACCGCCTGATGAAGACCAAAACGCTGAAGAAAATGCACC
AGAGCAAACTGTTCAAGCAGAAGGAGCGCCTGGACAAGAAGAACAACCAG
AAGAAGGCCAAGCGGGACCGCAACAACACCATCAAGAGCGTTCCCAAGCA
TCAGCGCAAGCAGCTCAAGTACGGAAAGGCCAACCAGACCAAATACCGAA
AGGGTCGGATGGTCAACAAAAAGGAGCTGCGGCGCAAACGGAATGCCGA
MXO02092.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:09:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32418-PA | 795 | CG32418-RA | 1..791 | 9..799 | 3955 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:33:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| vito-RA | 951 | CG32418-RA | 69..859 | 9..799 | 3955 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:33:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 5776416..5777149 | 799..66 | 3655 | 99.9 | Minus |
| 3L | 28110227 | 3L | 5777204..5777265 | 70..9 | 310 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 23:33:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TART-A | 13424 | TART-A 13424bp | 10217..10348 | 212..346 | 109 | 55.6 | Plus |
MXO02092.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:11 Download gff for
MXO02092.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32418-PA | 1..790 | 9..798 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:28:21 Download gff for
MXO02092.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| vito-RA | 69..858 | 9..798 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:16:31 Download gff for
MXO02092.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| vito-RA | 69..858 | 9..798 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:16:31 Download gff for
MXO02092.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 5776417..5777144 | 71..798 | 100 | <- | Minus |
| 3L | 5777204..5777265 | 9..70 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:28:21 Download gff for
MXO02092.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 5769517..5770244 | 71..798 | 100 | <- | Minus |
| arm_3L | 5770304..5770365 | 9..70 | 100 | | Minus |
