MXO02093.3prime Sequence
823 bp (639 high quality bases) assembled on 2007-01-18
> MXO02093.3prime
ATGGTCTAGAAAGCTTGCATCCTGATCCCCTTCCTCCGGTTCATCAAAGT
CCTTAACGTTCACGTCTGCATCCTCGCCGTACTGCAAGATACTGTCAATT
TGTAGCAGAAGATCGCCCACGCTCTCCTCGTCCTGGGAATCCAACGGGAA
AAATCTCACCAAACTGAAATCCTCAATTAGCGCGCCAATAGCCTGCGTAA
GCTTTGCGTATTTCTCGCCAAAACCAGTCCCGATGGTCAGCTCGCCCATC
AGACTGTGGGCATCCGGTTCCAGGTACATCTCCAGCTGTTTCCGCGCATC
GCTGCTCAGCAGATCCACTTTGGTCAGCACATTGATGTGCGGCTGCTCCA
TGTTGGCCATCACACTGAGCGCGGCCATGGTGCCGGAAATGAACTTGGCC
CCGTCCACCATGAACTGCGAGTCCAAGCAGAAGACGACGCATGTGCGGAA
GTTCCAGGACTCGAGCAGTTCCACCAGCTGTCTGCCCATCTTTAGGTGAG
TGAAGAGCTCGATCTGGCCGGGCATGTCGAACAGGATGTAGTCATCATCC
GGCTCGCCCACCATCAGCTCGTTCTCGCCGCCGCAGAGCTGTTCCTTCAG
CCATTCCTGGTTCTCGATCAAGAACTCCAGGCAGAAGATGAGGCCGCCGT
TCGGTCCGTAGTGCAGCTCTTCGTCCTCCATGGCATCGTCCAGGTGGATT
AGATCGCGAATGTCCGTCAGCGGGTTGTAGGTGAAGTGCTCTGCCGCCGG
ATCGAGGTTCACCACCTGAACATTTCTCTTGCAGTCCATCGCATATTGCT
GCATTANGCTGCAGTACGTCGAC
MXO02093.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:03:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2656-PA | 852 | CG2656-RA | 45..849 | 823..19 | 4006 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:18:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2656-RA | 1016 | CG2656-RA | 137..941 | 823..19 | 4014 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:18:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7144922..7145581 | 823..164 | 3289 | 99.8 | Minus |
| 3R | 32079331 | 3R | 7151048..7151195 | 166..19 | 740 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:18:03 has no hits.
MXO02093.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:11 Download gff for
MXO02093.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2656-PA | 45..852 | 16..823 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:15 Download gff for
MXO02093.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2656-RA | 137..945 | 15..823 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:04:30 Download gff for
MXO02093.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2656-RA | 137..945 | 15..823 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:04:30 Download gff for
MXO02093.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7144922..7145581 | 164..823 | 99 | -> | Minus |
| 3R | 7151051..7151199 | 15..163 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:15 Download gff for
MXO02093.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2970644..2971303 | 164..823 | 99 | -> | Minus |
| arm_3R | 2976773..2976921 | 15..163 | 98 | | Minus |
MXO02093.5prime Sequence
852 bp (677 high quality bases) assembled on 2007-04-03
> MXO02093.5prime
GCGGCCGCGACGTCCACATATACCTGCCGTTCACTATTATTTAGTGAAAT
GAGATATTATGATATTTTCTGAATTGTGATTAAAAAGGCAACTTTATGCC
CATGCAACAGAAACTATAAAAAATACAGAGAATGAAAAGAAACAGATAGA
TTTTTTAGTTCTTTAGGCCCGTAGTCTGCAAATCCTTTTATGATTTTCTA
TCAAACAAAAGAGGAAAATAGACCAGTTGCAATCCAAACGAGAGTCTAAT
AGAATGAGGTCGAAAAGTAAATCGCGCGGGTTTGTTACTGATAAAGCAGG
CAAGACCTAAAATGTGTAAAGGGCAAAGTGTATACTTTGGCGTCACCCCT
TACATATTTTAGGTCTTTTTTTATTGTGCGTAACTAACTTGCCATCTTCA
AACAGGAGGGCTGGAAGAAGCAGACCGCTAACACAGTACATAAAAAAGGA
GACATGAACGATGAACATCAAAAAGTTTGCAAAACAAGCAACAGTATTAA
CCTTTACTACCGCACTGCTGGCAGGAGGCGCAACTCAAGCGTTTGCGAAA
GAAACGAACCAAAAGCCATATAAGGAAACATACGGCATTTCCCATATTAC
ACGCCATGATATGCTGCAAATCCCTGAACAGCAAAAAAATGAAAAATATA
AAGTTCCTGAGTTCGATTCGTCCACAATTAAAAATATCTCTTCTGCAAAA
GGCCTGGACGTTTGGGACAGCTGGCCATTACAAAACACTGACGGCACTGT
CGCAAACTATCACGGCTACCACATCGTCTTTGCATTAGCCGGAGATCCTA
AAAATGCGGATGACACATCGATTTACATGTTCTATCAAAAAGTCGGCGAA
AC
MXO02093.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-11 12:09:07 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 19:14:33 has no hits.
Blast to na_all.dmel.RELEASE6 performed on 2014-11-28 19:14:30 has no hits.
Blast to na_te.dros performed on 2014-11-28 19:14:31 has no hits.
MXO02093.5prime Sim4 Records
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:10:20 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:10:20 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 22:49:22 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 22:49:22 has no hits.
