MXO02104.3prime Sequence
833 bp (712 high quality bases) assembled on 2007-01-19
> MXO02104.3prime
ATGGTCTAGAAAGCTTGCGACGACGTGGGTCAGATCGGTGGGCGGAGTGA
CGGGACGCGACATTTGCGACTTGTATACCTCCTCGTTGTCGTCCTCATTC
TCTGCGTGCGAGTCCTGAGAGTCGTGCGAGTCCTCGGAGTCTCTGCAGTC
CCTGGAATCCTCCACATCGGAGTCCTGGATGTCGTCGAGCGGCGTCGTTG
TGGTCATTGAAGCGGAAGCAGCTGCTGCCAGGAAGTGGACCTTAGCAGAG
GCCGTCGAGTTATTGTTGTCCGCCATTAGCTGGTGGTGCAGGTGGTGGCT
GTAGTTCAAGGAGGGCGGGATTCTGCCGGTGGAGCTGGTCTGCCGCCGCA
ATAGGTTACCCACGTAGGCAGCTGTGATGGCGGCATAGGTCACTCCAAGG
AGGGCGCCGGCCAGGACGTCGGACCAGTGGTGCCAGTAGTCGGCTACGCG
GCTCAGGGAAACGCAGAGGGCAGCCATAAGGAGCAGGAACTGCAGGACGT
GCCGCAGGACTCGCACTCCCCCTCGTCCCCGCCACACCCCGTGTACGTAG
AGGGCCAGCAGGACCATCGAATAGAAGCTCAAGCTGCTGTGGGCACTCGG
GAAACTGACGTGCAACTCGCGGATCTGTCGCGTGGAGAGGTTGTTGTTAG
TGCAGTGGAACTGCTCCACGTACAGCTCAGCGTTCTGGAGGTCCGAGCAG
GAGCTGCCCTCGTCGAAGCGCGGCTGGCAACCGTGGAAGAAGTGCGGCCT
CAGCCGCCCGACGGCGTGCTTCGCCAGCTCGGTGGTGAGATAGGTGGCTA
TGAAGCCGAAGCTGAAGGTGGCCTCTGCGCGCC
MXO02104.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:04:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11440-PA | 1005 | CG11440-RA | 188..1002 | 833..19 | 4025 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| laza-RA | 2316 | CG11440-RA | 761..1575 | 833..19 | 4045 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22459557..22460371 | 19..833 | 4045 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:03:54 has no hits.
MXO02104.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:14 Download gff for
MXO02104.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11440-PA | 188..1005 | 16..833 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:23:16 Download gff for
MXO02104.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| laza-RA | 761..1575 | 19..833 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:50:16 Download gff for
MXO02104.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| laza-RA | 761..1575 | 19..833 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:50:16 Download gff for
MXO02104.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22459557..22460371 | 19..833 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:23:16 Download gff for
MXO02104.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22452657..22453471 | 19..833 | 99 | | Plus |
MXO02104.5prime Sequence
498 bp (464 high quality bases) assembled on 2007-01-19
> MXO02104.5prime
CAGTCGACATGCACACTTTCAAAAGGGGGCTTCTNTTTGCTCTGATCTGA
GCATACNGGTATCCCTACAAGGGACTGCACGATCACGGTGCCGATGCTAC
TGCTCATGATGCTCCTGCTCCCGATGCTCTTCGTGGCCGTGGTGGAGATC
ATGCGGATCTGCAAGCGCTTCCGCACCAGGCTCTACTTCCGCAATCTGTG
GCGCGCAGAGGCCACCTTCAGCTTCGGCTTCATAGCCACCTATCTCACCA
CCGAGCTGGCGAAGCACGCCGTCGGGCGGCTGAGGCCGCACTTCTTCCAC
GGTTGCCAGCCGCGCCTCGACGATGGCAGCTCCTGCTCGGACCTCCAGAA
CGCTGAGCTGTACGTGGAGCAGTTCCACTGCACTAACAACAACCTCTCCA
CGCGACAGATCCGCGAGTTGCACGTCAGTTTCCCGAGTGCCCACAGCAGC
TTGAGCTTCTATTCGATGGTCCTGCTGGCCCTCTACGTACACGGGGTG
MXO02104.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:04:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11440-PA | 1005 | CG11440-RA | 1..486 | 9..498 | 2290 | 99.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:27:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| laza-RA | 2316 | CG11440-RA | 573..1059 | 8..498 | 2355 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:27:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22460073..22460559 | 498..8 | 2255 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:27:33 has no hits.
MXO02104.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:14 Download gff for
MXO02104.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11440-PA | 1..486 | 9..498 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:34:38 Download gff for
MXO02104.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| laza-RA | 566..1059 | 1..498 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:03:56 Download gff for
MXO02104.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| laza-RA | 566..1059 | 1..498 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:03:56 Download gff for
MXO02104.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22460073..22460562 | 1..498 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:34:38 Download gff for
MXO02104.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22453173..22453662 | 1..498 | 98 | | Minus |
