MXO02105.3prime Sequence
854 bp (714 high quality bases) assembled on 2007-01-19
> MXO02105.3prime
ATGGTCTAGAAAGCTTGCGACGACGTGGGTCAGATCGGTGGGCGGAGTGA
CGGGACGCGACATTTGCGACTTGTATACCTCCTCGTTGTCGTCCTCATTC
TCTGCGTGCGAGTCCTGAGAGTCGTGCGAGTCCTCGGAGTCTCTGCAGTC
CCTGGAATCCTCCACATCGGAGTCCTGGATGTCGTCGAGCGGCGTCGTTG
TGGTCATTGAAGCGGAAGCAGCTGCTGCCAGGAAGTGGACCTTAGCAGAG
GCCGTCGAGTTATTGTTGTCCGCCATTAGCTGGTGGTGCAGGTGGTGGCT
GTAGTTCAAGGAGGGCGGGATTCTGCCGGTGGAGCTGGTCTGCCGCCGCA
ATAGGTTACCCACGTAGGCAGCTGTGATGGCGGCATAGGTCACTCCAAGG
AGGGCGCCGGCCAGGACGTCGGACCAGTGGTGCCAGTAGTCGGCTACGCG
GCTCAGGGAAACGCAGAGGGCAGCCATAAGGAGCAGGAACTGCAGGACGT
GCCGCAGGACTCGCACTCCCCCTCGTCCCCGCCACACCCCGTGTACGTAG
AGGGCCAGCAGGACCATCGAATAGAAGCTCAAGCTGCTGTGGGCACTCGG
GAAACTGACGTGCAACTCGCGGATCTGTCGCGTGGAGAGGTTGTTGTTAG
TGCAGTGGAACTGCTCCACGTACAGCTCAGCGTTCTGGAGGTCCGAGCAG
GAGCTGCCATCGTCGAGGCGCGGCTGGCAACCGTGGAAGAAGTGCGGCCT
CAGCCGCCCGACGGCGTGCTTCGCCAGCTCGGTGGTGAGATAGGTGGCTA
TGAAGCCGAAGCTGAGGGTGGCCTCTGCGCGCCACAGATTGCGGAAGTAG
AGCC
MXO02105.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:04:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11440-PA | 1005 | CG11440-RA | 167..1002 | 854..19 | 4155 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:28:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| laza-RA | 2316 | CG11440-RA | 740..1575 | 854..19 | 4165 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:28:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22459557..22460392 | 19..854 | 4165 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:28:48 has no hits.
MXO02105.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:14 Download gff for
MXO02105.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11440-PA | 167..1005 | 16..854 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:09 Download gff for
MXO02105.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| laza-RA | 740..1575 | 19..854 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:04 Download gff for
MXO02105.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| laza-RA | 740..1575 | 19..854 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:04 Download gff for
MXO02105.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22459557..22460392 | 19..854 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:09 Download gff for
MXO02105.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22452657..22453492 | 19..854 | 99 | | Plus |
MXO02105.5prime Sequence
784 bp (782 high quality bases) assembled on 2007-01-19
> MXO02105.5prime
CAGTCGACATGCACACTTTCAAAAGGGGCTTCTTTTGCTCTGATCTGAGC
ATACGGTATCCCTACAAGGACTGCACGATCACGGTGCCGATGCTACTGCT
CATGATGCTCCTGCTCCCGATGCTCTTCGTGGCCGTGGTGGAGATCATGC
GGATCTGCAAGCGCTTCCGCACCAGGCTCTACTTCCGCAATCTGTGGCGC
GCAGAGGCCACCTTCAGCTTCGGCTTCATAGCCACCTATCTCACCACCGA
GCTGGCGAAGCACGCCGTCGGGCGGCTGAGGCCGCACTTCTTCCACGGTT
GCCAGCCGCGCCTCGACGATGGCAGCTCCTGCTCGGACCTCCAGAACGCT
GAGCTGTACGTGGAGCAGTTCCACTGCACTAACAACAACCTCTCCACGCG
ACAGATCCGCGAGTTGCACGTCAGTTTCCCGAGTGCCCACAGCAGCTTGA
GCTTCTATTCGATGGTCCTGCTGGCCCTCTACGTACACGGGGTGTGGCGG
GGACGAGGGGGAGTGCGAGTCCTGCGGCACGTCCTGCAGTTCCTGCTCCT
TATGGCTGCCCTCTGCGTTTCCCTGAGCCGCGTAGCCGACTACTGGCACC
ACTGGTCCGACGTCCTGGCCGGCGCCCTCCTTGGAGTGACCTATGCCGCC
ATCACAGCTGCCTACGTGGGTAACCTATTGCGGCGGCAGACCAGCTCCAC
CGGCAGAATCCCGCCCTCCTTGAACTACAGCCACCACCTGCACCACCAGC
TAATGGCGGACAACAATAACTCGACGGCCTCTGC
MXO02105.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:04:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11440-PA | 1005 | CG11440-RA | 1..776 | 9..784 | 3880 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:25:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| laza-RA | 2316 | CG11440-RA | 573..1349 | 8..784 | 3885 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:25:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22459783..22460559 | 784..8 | 3885 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:25:33 has no hits.
MXO02105.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:15 Download gff for
MXO02105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11440-PA | 1..776 | 9..784 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:20 Download gff for
MXO02105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| laza-RA | 566..1349 | 1..784 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:58:46 Download gff for
MXO02105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| laza-RA | 566..1349 | 1..784 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:58:46 Download gff for
MXO02105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22459783..22460562 | 1..784 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:20 Download gff for
MXO02105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22452883..22453662 | 1..784 | 99 | | Minus |
