MXO02106.3prime Sequence
546 bp (508 high quality bases) assembled on 2007-01-19
> MXO02106.3prime
ATGGTCTAGAAAGCTTGCATGGCTAACAGTTTGCTTATTCAGATAAGCCA
TTAAGGCCTGGAGCCGCTTCTTGATGTTCTTCTGATCGTCCAGAGTGCAG
CCAAGCAAAACGCTCTCGAACTTCTTGTCGACCGGCCCAACATCGGCCTC
GGGCACGGTGTCCATGTGTCCGGATGGATCCATTGAGCTGCTGCAGCAGG
CGTTTAAGTAAAACTGGCATCGTTGGCGTCCGATCACGGGATCACCCATC
TTGATCATGCTGTCAATCAATACATTTATCTGGCTAAGGGAATCCTCCTG
AGAGTTGTCCCGAACAGTGCGCACACGCAGCTCCACGGTGGCCAAGCGAG
AGCTCACCCGTTGTAGGTACAAAATGATCTCCTCTCGTTCAGCTTCGCTC
ATGTTCTGCATCATTTCGTTGCTCTTGATCAGATCCATGGACATCAGAAG
GTAGTCTTTCTTCTCCTGCANGTTGAGTGCATCCTTGCGCAGCTTCTCCA
CACGTGCATCCAAACTATCCAGTATGGTGACAAATCTCTCGCTGGC
MXO02106.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:04:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7945-PB | 747 | CG7945-RB | 217..744 | 546..19 | 2621 | 99.8 | Minus |
CG7945-PA | 789 | CG7945-RA | 259..786 | 546..19 | 2621 | 99.8 | Minus |
CG7945-PC | 429 | CG7945-RC | 1..426 | 444..19 | 2130 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:47:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7945-RA | 1451 | CG7945-RA | 813..1340 | 546..19 | 2629 | 99.8 | Minus |
CG7945-RB | 1275 | CG7945-RB | 637..1164 | 546..19 | 2629 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:47:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15521822..15522197 | 19..394 | 1880 | 100 | Plus |
3L | 28110227 | 3L | 15522360..15522504 | 393..537 | 714 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:47:49 has no hits.
MXO02106.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:15 Download gff for
MXO02106.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7945-PA | 259..789 | 15..546 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:45:27 Download gff for
MXO02106.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7945-RB | 637..1169 | 11..546 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:33:16 Download gff for
MXO02106.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7945-RB | 637..1169 | 11..546 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:33:16 Download gff for
MXO02106.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15521817..15522195 | 11..392 | 98 | <- | Plus |
3L | 15522360..15522507 | 393..541 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:45:27 Download gff for
MXO02106.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15514917..15515295 | 11..392 | 98 | <- | Plus |
arm_3L | 15515460..15515607 | 393..541 | 97 | | Plus |
MXO02106.5prime Sequence
810 bp (725 high quality bases) assembled on 2007-01-19
> MXO02106.5prime
CAGTCGACATGGAAGTTGATGCGCCAACAACGCAGGAAACCAGTGACACT
CATCATCATCACCATAGTACTTATCACCAGCAGCTGCATCAGATCTCGCC
CAGCGATTACCACTCGGAGGCATCCATGAATTTTGATCATTTGCAAGACC
TGAGGGCCGATGCCATGGCCTCCTCATCCCCATCCGGATCCGGAGGTGGT
GGCAATGGCGGGAACAGCTCCTACGGACTCGTCGACGATAGTAGAGCTCT
GGACAGACCATTTAACGCCAGCGAGAGATTTGTCACCATACTGGATAGTT
TGGATGCACGTGTGGAGAAGCTGCGCAAGGATGCACTCAACCTGCAGGAG
AAGAAAGACTACCTTCTGATGTCCATGGATCTGATCAAGAGCAACGAAAT
GATGCAGAACATGAGCGAAGCTGAACGAGAGGAGATCATTTTGTACCTAC
AACGGGTGAGCTCTCGCTTGGCCACCGTGGAGCTGCGTGTGCGCACTGTT
CGGGACAACTCTCAGGAGGATTCCCTTAGCCAGATAAATGTATTGATTGA
CAGCATGATCAAGATGGGTGATCCCGTGATCGGACGCCAACGATGCCAGT
TTTACTTAAACGCCTGCTGCAGCAGCTCAATGGATCCATCCGGACACATG
GACACCGTGCCCGAGGCCGATGTTGGGCCGGTCGACAAGAAGTTCGAGAG
CGTTTTGCTTGGCTGCACTCTGGACGATCAGAAGAACATCAAGAAGCGGC
TCCAGGCCTTAATGGCTTATCTGAATAAGCAAACTGTTAGCCATGCAAGC
TTTCTAGACC
MXO02106.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:04:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7945-PA | 789 | CG7945-RA | 1..786 | 9..794 | 3930 | 100 | Plus |
CG7945-PB | 747 | CG7945-RB | 205..744 | 255..794 | 2700 | 100 | Plus |
CG7945-PC | 429 | CG7945-RC | 1..426 | 369..794 | 2130 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:50:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7945-RA | 1451 | CG7945-RA | 555..1340 | 9..794 | 3930 | 100 | Plus |
CG7945-RB | 1275 | CG7945-RB | 625..1164 | 255..794 | 2700 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:50:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15521822..15522197 | 794..419 | 1880 | 100 | Minus |
3L | 28110227 | 3L | 15522968..15523215 | 256..9 | 1240 | 100 | Minus |
3L | 28110227 | 3L | 15522360..15522504 | 420..276 | 725 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:50:04 has no hits.
MXO02106.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:16 Download gff for
MXO02106.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7945-PA | 1..789 | 9..798 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:51 Download gff for
MXO02106.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7945-RA | 549..1345 | 1..802 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:26 Download gff for
MXO02106.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7945-RA | 549..1345 | 1..802 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:26 Download gff for
MXO02106.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15522968..15523221 | 1..256 | 98 | | Minus |
3L | 15521817..15522195 | 421..802 | 98 | <- | Minus |
3L | 15522360..15522502 | 278..420 | 100 | <- | Minus |
3L | 15522560..15522580 | 257..277 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:51 Download gff for
MXO02106.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15514917..15515295 | 421..802 | 98 | <- | Minus |
arm_3L | 15515460..15515602 | 278..420 | 100 | <- | Minus |
arm_3L | 15515660..15515680 | 257..277 | 100 | <- | Minus |
arm_3L | 15516068..15516321 | 1..256 | 98 | | Minus |