MXO02110.3prime Sequence
849 bp (686 high quality bases) assembled on 2007-01-19
> MXO02110.3prime
ATGGTCTAGAAAGCTTGCGCAGAACTCGGTCTGATCCCCGCCGTTGCGGA
GGACCGCTGAGACCCGCCACGTCATCGACTCGTAGAGCATCTCAATTTTG
TCCACCATGTCCTGGTCGCTGTGCCAGACGTCGTACAAGACGGCTCGAAA
CTCGCTGACATTTTTGGGCGCCTGATTCTGAATCCTCGGCTGGATGATGG
CCATCAATTGCTCGAGGAGATTGAGGTCATTGCAGACACTGCCCTCCGGT
CCCATCAGCGAGTCAAGGAAGATCTCCTTTGGCGGCGTTGATTCGTCGAC
GAATTTAAGATCGTCCATGTTGAAGATGTTGCGCCAGTCGCGCACGGTCC
AATCCTGATGGGCGGTGGCCCAGGCCAACCTCCTTTTTTTCGCCCCCTCA
CTGAGGCCGAAAGTGCTGGGCTCCTTCGGCTGTGGCGATCCTCTCGGTTG
CCGTATGCCTTTGGAGCGAATCTCGCTGATCCTGCGCTGCAAGGTCCTGC
GGCTGACCTCTATGCCGTGTCGGGCCAACTCCCGCTGCACATCGATGGAG
GTGTAGTGCGGATTGTCGCTCAGCATTTGCTCGACAATTTGCCGGTTCTC
CAGGACCTTGGGTCTGCCAACATCGCGCTTCTTTTCCTCCTCCTGCGCAA
CCGCCACGGGCGCCGCTGTTTTCAGTTTTTGCGGCAACCTCAGCGTGGCA
GTCTTCCCCTCGAGCAGCTCACACTCACGAATGCAGCTTATCACGCTCTC
CACGTCGCACTCCAGGATCTGGGCTATCTCCTCACAGCTGTTCGAGCCCT
TCACCGCCTTCACAATACTTCGAACTTCGGGAGCGAGAACCATGTCGAC
MXO02110.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:05:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4570-PA | 828 | CG4570-RA | 1..825 | 843..19 | 4100 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:33:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4570-RA | 1260 | CG4570-RA | 207..1036 | 848..19 | 4120 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:33:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10857013..10857842 | 848..19 | 4120 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:33:01 has no hits.
MXO02110.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:18 Download gff for
MXO02110.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4570-PA | 1..828 | 18..843 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:28:17 Download gff for
MXO02110.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4570-RA | 206..1046 | 12..849 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:16:26 Download gff for
MXO02110.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4570-RA | 206..1046 | 12..849 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:16:26 Download gff for
MXO02110.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10857012..10857852 | 12..849 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:28:17 Download gff for
MXO02110.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6682734..6683574 | 12..849 | 99 | | Minus |
MXO02110.5prime Sequence
797 bp (751 high quality bases) assembled on 2007-01-19
> MXO02110.5prime
CAGTCGACATGGTTCTCGCTCCCGAAGTTCGAAGTATTGTGAAGGCGCTG
AAGGGCTCGAACAGCTGTGAGGAGATAGCCCAGATCCTGGAGTGCGACGT
GGAGAGCGTGATAAGCTGCATTCGTGAGTGTGAGCTGCTCGAGGGGAAGA
CTGCCACGCTGAGGTTGCCGCAAAAACTGAAAACAGCGGCGCCCGTGGCG
GTTGCGCAGGAGGAGGAAAAGAAGCGCGATGTTGGCAGACCCAAGGTCCT
GGAGAACCGGCAAATTGTCGAGCAAATGCTGAGCGACAATCCGCACTACA
CCTCCATCGATGTGCAGCGGGAGTTGGCCCGACACGGCATAGAGGTCAGC
CGCAGGACCTTGCAGCGCAGGATCAGCGAGATTCGCTCCAAAGGCATACG
GCAACCGAGAGGATCGCCACAGCCGAAGGAGCCCAGCACTTTCGGCCTCA
GTGAGGGGGCGAAAAAAAGGAGGTTGGCCTGGGCCACCGCCCATCAGGAT
TGGACCGTGCGCGACTGGCGCAACATCTTCAACATGGACGATCTTAAATT
CGTCGACGAATCAACGCCGCCAAAGGAGATCTTCCTTGACTCGCTGATGG
GACCGGAGGGCAGTGTCTGCAATGACCTCAATCTCCTCGAGCAATTGATG
GCCATCATCCAGCCGAGGATTCAGAATCAGGCGCCCAAAAATGTCAGCGA
GTTTCGAGCCGTCTTGTACGACGTCTGGCACAGCGACCAGGACATGGTGG
ACAAAATTGAGATGCTCTACGAGTCGATGACGTGGCGGGTCTCAGCG
MXO02110.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:05:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4570-PA | 828 | CG4570-RA | 1..789 | 9..797 | 3945 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:22:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4570-RA | 1260 | CG4570-RA | 207..1000 | 4..797 | 3955 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:22:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10857013..10857806 | 4..797 | 3955 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:22:37 has no hits.
MXO02110.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:18 Download gff for
MXO02110.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4570-PA | 1..789 | 9..797 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:03 Download gff for
MXO02110.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4570-RA | 204..1000 | 1..797 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:17 Download gff for
MXO02110.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4570-RA | 204..1000 | 1..797 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:17 Download gff for
MXO02110.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10857010..10857806 | 1..797 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:03 Download gff for
MXO02110.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6682732..6683528 | 1..797 | 99 | | Plus |