MXO02119.5prime Sequence
471 bp (471 high quality bases) assembled on 2007-01-19
> MXO02119.5prime
CAGTCGACATGGCTGGAGTACTCTTTGAGGACATCTTCAACGTAAAGGAC
ATGGATCCGGAGGGCAAAAAGTTCGACCGTGTATCCCGCCTGCACTGCGA
GTCCGAGTCGTTTAAGATGGACCTCATCCTGGACATCAACTCGTGGCTAT
ACCCCATGGAGCTGGGCGACAAGTTCCGCCTGGTTTTGGCCACCACCCTG
CGCGAGGATGGTTGCCCGGACAGCGGGGAGTACAATCCAATGGAGCACGA
GGGAACGCGGGCGGACAGCTTTGAGTACGTGATGTACGGCAAGATCTACA
GGATCGAGGGCGACGAAGCACACAATGAGGCCTCCCGGCTCTCCGCCTAC
GTGTCATTCGGCGGCTTGCTGATGCGACTTCAGGGTGACGCCAACAATCT
TCATGGCTTCGAGGTGGACCAGCACATGTACCTGCTGATGAAGCGGCTGG
CCTTCGCAAGCTTTCTAGACC
MXO02119.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:07:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11246-PA | 450 | Rpb8-RA | 1..447 | 9..455 | 2235 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:31:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rpb8-RA | 692 | CG11246-RA | 191..637 | 9..455 | 2235 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:31:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21729193..21729639 | 9..455 | 2235 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:31:32 has no hits.
MXO02119.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:24 Download gff for
MXO02119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11246-PA | 1..450 | 9..458 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:35:49 Download gff for
MXO02119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rpb8-RA | 182..648 | 1..467 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:25:20 Download gff for
MXO02119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rpb8-RA | 182..648 | 1..467 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:25:20 Download gff for
MXO02119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21729185..21729635 | 1..451 | 99 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:35:49 Download gff for
MXO02119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21722285..21722735 | 1..451 | 99 | <- | Plus |
