Clone Sequence Records
MXO02121.3prime Sequence
450 bp (450 high quality bases) assembled on 2007-01-19
> MXO02121.3prime
ATGGTCTAGAAAGCTTGCCAGAGTTCCGGGGGCAGGGGCCACGTTCACGG
AGGTGGCAGAGTTGATGTGTCCGGCGAGGGGAGCGGTGTGGATGGCACCA
CGGGTCTTGGCCACATAGACGCCCTCATGGCCATGGCCGGCGGCGAGACC
GGGTCCCTGGGCCAGGTTGATTCCGGGAACAGCAGCGCCGTGCCATCCGG
CACCGGTCAGACCCCAGGGAGCAGCGCTGGCATGGACGGCAACGGCGGCA
GGGGCACCCCAGGGAGCACCGTTCCAGGCGCCGTTCCAGGCACCGTTCCA
GGCACCATTCCAGGCTCCGTTCCACAGACCGGCTCCATGGGCCACGGGGC
TCACATAGGACACACCGGGAGCGATCTGGGCCCACGAGGCATGAGCTCCA
GCCAGGGCGCACACGAACATGACTACGGCAACGGCGAACTTCATGTCGAC
MXO02121.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:08:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7214-PA | 429 | CG7214-RA | 1..426 | 444..19 | 2130 | 100 | Minus |
| CG7216-PA | 408 | Acp1-RA | 317..360 | 107..64 | 145 | 93.1 | Minus |
| CG31904-PD | 1212 | CG31904-RD | 980..1023 | 107..64 | 145 | 93.1 | Minus |
| CG31904-PB | 1212 | CG31904-RB | 980..1023 | 107..64 | 145 | 93.1 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:27:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7214-RA | 1041 | CG7214-RA | 85..512 | 446..19 | 2140 | 100 | Minus |
| Acp1-RA | 858 | CG7216-RA | 369..416 | 111..64 | 180 | 91.7 | Minus |
| CG31904-RB | 3572 | CG31904-RB | 3087..3134 | 111..64 | 180 | 91.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:27:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7744211..7744632 | 19..440 | 2110 | 100 | Plus |
| 2L | 23513712 | 2L | 7734853..7734900 | 64..111 | 180 | 91.7 | Plus |
| 2L | 23513712 | 2L | 7741004..7741051 | 64..111 | 180 | 91.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:27:50 has no hits.
MXO02121.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:26 Download gff for
MXO02121.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7214-PA | 1..429 | 15..444 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:34:44 Download gff for
MXO02121.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7214-RA | 81..516 | 14..450 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:07 Download gff for
MXO02121.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7214-RA | 81..516 | 14..450 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:07 Download gff for
MXO02121.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7744207..7744632 | 14..440 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:34:44 Download gff for
MXO02121.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7744207..7744632 | 14..440 | 99 | | Plus |
MXO02121.5prime Sequence
450 bp (450 high quality bases) assembled on 2007-01-19
> MXO02121.5prime
CAGTCGACATGAAGTTCGCCGTTGCCGTAGTCATGTTCGTGTGCGCCCTG
GCTGGAGCTCATGCCTCGTGGGCCCAGATCGCTCCCGGTGTGTCCTATGT
GAGCCCCGTGGCCCATGGAGCCGGTCTGTGGAACGGAGCCTGGAATGGTG
CCTGGAACGGTGCCTGGAACGGCGCCTGGAACGGTGCTCCCTGGGGTGCC
CCTGCCGCCGTTGCCGTCCATGCCAGCGCTGCTCCCTGGGGTCTGACCGG
TGCCGGATGGCACGGCGCTGCTGTTCCCGGAATCAACCTGGCCCAGGGAC
CCGGTCTCGCCGCCGGCCATGGCCATGAGGGCGTCTATGTGGCCAAGACC
CGTGGTGCCATCCACACCGCTCCCCTCGCCGGACACATCAACTCTGCCAC
CTCCGTGAACGTGGCCCCTGCCCCCGGAACTCTGGCAAGCTTTCTAGACC
MXO02121.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:08:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7214-PA | 429 | CG7214-RA | 1..426 | 9..434 | 2130 | 100 | Plus |
| CG7216-PA | 408 | Acp1-RA | 317..360 | 346..389 | 145 | 93.1 | Plus |
| CG31904-PD | 1212 | CG31904-RD | 980..1023 | 346..389 | 145 | 93.1 | Plus |
| CG31904-PB | 1212 | CG31904-RB | 980..1023 | 346..389 | 145 | 93.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:18:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7214-RA | 1041 | CG7214-RA | 85..512 | 7..434 | 2140 | 100 | Plus |
| Acp1-RA | 858 | CG7216-RA | 369..416 | 342..389 | 180 | 91.7 | Plus |
| CG31904-RB | 3572 | CG31904-RB | 3087..3134 | 342..389 | 180 | 91.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:18:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7744211..7744632 | 434..13 | 2110 | 100 | Minus |
| 2L | 23513712 | 2L | 7734853..7734900 | 389..342 | 180 | 91.7 | Minus |
| 2L | 23513712 | 2L | 7741004..7741051 | 389..342 | 180 | 91.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:18:12 has no hits.
MXO02121.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:26 Download gff for
MXO02121.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7214-PA | 1..429 | 9..438 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:19 Download gff for
MXO02121.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7214-RA | 79..516 | 1..439 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:04:36 Download gff for
MXO02121.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7214-RA | 79..516 | 1..439 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:04:36 Download gff for
MXO02121.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7744207..7744632 | 13..439 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:19 Download gff for
MXO02121.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7744207..7744632 | 13..439 | 99 | | Minus |
