Clone Sequence Records
MXO02122.3prime Sequence
474 bp (474 high quality bases) assembled on 2007-01-19
> MXO02122.3prime
ATGGTCTAGAAAGCTTGCGTGCTCCTCCAGCTCGAGTCCATGCTCCTTCA
TTTGCTCGTAAATGCATTCCTCGTAGGCGAAGGCAGCGTCGCAATGATCC
TCGGGTGTCTCGATGGCCTCGCACTTGGCCACCACCTCGGCGGGAGCGTC
TTCCTTCTCTGCATCGTGCTTGCTCATGACCTTGACCAACTCGATGGCGT
GTTCCTTGTTCAGCTTACCGGATTCATCCATTATCTGCAGCTTTTTCATC
ACGCAGGCGCGCAGGCACTTGGCCTCGTGTCTCTCGGGCAGGTCGTGGCT
CATCAGCTGCTCCACATCCTCATCGGTGGCTCCCGTCTCAGCCTTGCACT
CGTTGGCCAGCTCGGCGGCGTGGTCCCTGTTGATCTCCTCGTGCGGCTTG
GCGCTGGTGGCGCCCAGGCAGAGGATGCCCACTAGGAGCAGGACGGTCAG
GTGAACCAGATGCGACATGTCGAC
MXO02122.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:08:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1668-PA | 453 | Pbprp2-RA | 1..450 | 468..19 | 2250 | 100 | Minus |
CG1668-PB | 453 | Pbprp2-RB | 1..450 | 468..19 | 2250 | 100 | Minus |
CG6641-PA | 432 | Pbprp5-RA | 189..215 | 271..245 | 135 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp19d-RB | 624 | CG1668-RB | 44..498 | 473..19 | 2260 | 99.8 | Minus |
Obp19d-RA | 1101 | CG1668-RA | 521..975 | 473..19 | 2260 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 20420133..20420285 | 473..321 | 750 | 99.3 | Minus |
X | 23542271 | X | 20420577..20420713 | 231..95 | 685 | 100 | Minus |
X | 23542271 | X | 20420415..20420504 | 321..232 | 450 | 100 | Minus |
X | 23542271 | X | 20420778..20420853 | 94..19 | 380 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:28:00 has no hits.
MXO02122.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:26 Download gff for
MXO02122.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1668-PB | 1..453 | 16..468 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:34:49 Download gff for
MXO02122.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp19d-RA | 520..975 | 19..474 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:13 Download gff for
MXO02122.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp19d-RA | 520..975 | 19..474 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:13 Download gff for
MXO02122.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20420132..20420285 | 321..474 | 98 | -> | Minus |
X | 20420416..20420504 | 232..320 | 100 | -> | Minus |
X | 20420577..20420713 | 95..231 | 100 | -> | Minus |
X | 20420778..20420853 | 19..94 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:34:49 Download gff for
MXO02122.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20291159..20291312 | 321..474 | 98 | -> | Minus |
arm_X | 20291443..20291531 | 232..320 | 100 | -> | Minus |
arm_X | 20291604..20291740 | 95..231 | 100 | -> | Minus |
arm_X | 20291805..20291880 | 19..94 | 100 | | Minus |
MXO02122.5prime Sequence
474 bp (474 high quality bases) assembled on 2007-01-19
> MXO02122.5prime
CAGTCGACATGTCGCATCTGGTTCACCTGACCGTCCTGCTCCTAGTGGGC
ATCCTCTGCCTGGGCGCCACCAGCGCCAAGCCGCACGAGGAGATCAACAG
GGACCACGCCGCCGAGCTGGCCAACGAGTGCAAGGCTGAGACGGGAGCCA
CCGATGAGGATGTGGAGCAGCTGATGAGCCACGACCTGCCCGAGAGACAC
GAGGCCAAGTGCCTGCGCGCCTGCGTGATGAAAAAGCTGCAGATAATGGA
TGAATCCGGTAAGCTGAACAAGGAACACGCCATCGAGTTGGTCAAGGTCA
TGAGCAAGCACGATGCAGAGAAGGAAGACGCTCCCGCCGAGGTGGTGGCC
AAGTGCGAGGCCATCGAGACACCCGAGGATCATTGCGACGCTGCCTTCGC
CTACGAGGAATGCATTTACGAGCAAATGAAGGAGCATGGACTCGAGCTGG
AGGAGCACGCAAGCTTTCTAGACC
MXO02122.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:08:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1668-PA | 453 | Pbprp2-RA | 1..450 | 9..458 | 2250 | 100 | Plus |
CG1668-PB | 453 | Pbprp2-RB | 1..450 | 9..458 | 2250 | 100 | Plus |
CG6641-PA | 432 | Pbprp5-RA | 189..215 | 206..232 | 135 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp19d-RB | 624 | CG1668-RB | 44..498 | 4..458 | 2260 | 99.8 | Plus |
Obp19d-RA | 1101 | CG1668-RA | 521..975 | 4..458 | 2260 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 20420133..20420285 | 4..156 | 750 | 99.3 | Plus |
X | 23542271 | X | 20420577..20420713 | 246..382 | 685 | 100 | Plus |
X | 23542271 | X | 20420415..20420504 | 156..245 | 450 | 100 | Plus |
X | 23542271 | X | 20420778..20420853 | 383..458 | 380 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:28:13 has no hits.
MXO02122.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:27 Download gff for
MXO02122.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1668-PB | 1..453 | 9..461 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:34:53 Download gff for
MXO02122.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp19d-RA | 517..975 | 1..458 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:22 Download gff for
MXO02122.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp19d-RA | 517..975 | 1..458 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:22 Download gff for
MXO02122.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20420129..20420285 | 1..156 | 98 | -> | Plus |
X | 20420416..20420504 | 157..245 | 100 | -> | Plus |
X | 20420577..20420713 | 246..382 | 100 | -> | Plus |
X | 20420778..20420853 | 383..458 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:34:53 Download gff for
MXO02122.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20291156..20291312 | 1..156 | 98 | -> | Plus |
arm_X | 20291443..20291531 | 157..245 | 100 | -> | Plus |
arm_X | 20291604..20291740 | 246..382 | 100 | -> | Plus |
arm_X | 20291805..20291880 | 383..458 | 100 | | Plus |