MXO02128.3prime Sequence
642 bp (642 high quality bases) assembled on 2007-01-19
> MXO02128.3prime
ATGGTCTAGAAAGCTTGCATCTTCATTATCAGAGTACCAGGATAGGCGCT
CTTCGTAGAAGTGGATTACCATTCGTGGGATTTTTTCATTGGCCACTGAG
GAGGGCACCATTTCTGCTTGGTCCACGCCTTTGAACTGAATGAGGAATGT
CAGGCGGCCATTATTGTCGGAGGCACCCAAGATCTTTTCGGCCTCCAGGC
CGCGATCGAATCCGGTAGATCCTGAAACGGGAATGGTGTCCTGCTCCGCA
TCTGTGGTACGTTTTGATTTATTGCCAGAGGGCGCTGTTGGTTCTTCGGA
CTTTCGCTTGCTTGCTGTGGACGTCGAACTGCTGGCGCGTCCTTGAGTTT
CCTTGGCCTTGGCGCTGCTGCTGGGTCGATCCTTCTTGGAGGCGGCTGAC
TTCTCCTCATCCTTGCGGCTCGCCTCGTACTGCTGGATAAGATCCTGGCA
GTCGAGATTGTTCTCCGGCTCCCACGTGTTCTCAGTTTCGGGATAGCCCT
TCCATTTCAGATAGTACTCCACCTTTCCCTTGCGCACCCGCCTGTCGATG
ATCTTTTCCACGGCGTACTCCTCCTCCTCCTCTTCGGCATCGGAAACCTT
TGCCGAGCTCTCAGGGTTGTCGATTTTCTTGCCCATGTCGAC
MXO02128.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:09:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8409-PA | 621 | Su(var)205-RA | 1..618 | 636..19 | 3090 | 100 | Minus |
| CG8409-PB | 621 | Su(var)205-RB | 1..618 | 636..19 | 3090 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Su(var)205-RB | 1109 | CG8409-RB | 280..897 | 636..19 | 3090 | 100 | Minus |
| Su(var)205-RA | 992 | CG8409-RA | 163..780 | 636..19 | 3090 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8209838..8210105 | 19..286 | 1340 | 100 | Plus |
| 2L | 23513712 | 2L | 8210353..8210475 | 285..407 | 615 | 100 | Plus |
| 2L | 23513712 | 2L | 8210549..8210668 | 405..524 | 600 | 100 | Plus |
| 2L | 23513712 | 2L | 8210727..8210843 | 520..636 | 585 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:15:32 has no hits.
MXO02128.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:30 Download gff for
MXO02128.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8409-PB | 1..621 | 15..636 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:47 Download gff for
MXO02128.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Su(var)205-RA | 157..783 | 15..642 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:27 Download gff for
MXO02128.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Su(var)205-RA | 157..783 | 15..642 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:27 Download gff for
MXO02128.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8210730..8210847 | 523..642 | 96 | | Plus |
| 2L | 8209834..8210103 | 15..284 | 99 | <- | Plus |
| 2L | 8210353..8210473 | 285..405 | 100 | <- | Plus |
| 2L | 8210550..8210666 | 406..522 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:47 Download gff for
MXO02128.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8209834..8210103 | 15..284 | 99 | <- | Plus |
| arm_2L | 8210353..8210473 | 285..405 | 100 | <- | Plus |
| arm_2L | 8210550..8210666 | 406..522 | 100 | <- | Plus |
| arm_2L | 8210730..8210847 | 523..642 | 96 | | Plus |
