MXO02130.3prime Sequence
624 bp (621 high quality bases) assembled on 2007-01-19
> MXO02130.3prime
ATGGTCTAGAAAGCTTGCCTTCACTCTTGCTTCGAATTTCACTTTAATGT
TTTGCTGAGTGCGCAGTACGATTCCGTTCTCAAAGGTGAGATCCTCCAAC
TGAGTGGCGGGCAGGAGTTTGAAGTTCCTAATCACAGCGGCTAGGAGCAC
CTTAATTTCCAGGACGCCGAATTTCTGACCTATGCAATTCCTTGGGCCTG
CACTGAAGGGCACAAAGGCAAAGGGATGACGATTCACAGAGTTCTCGGGC
AGAAAACGTTCGGGCAGGAATTGATTTGGTTTCGGGAAATGCCGTGCGTC
TCTCATGATGTCGTATATGTGGATGCTAATCTGGGCATTCTTGGGTAGGA
CTAAGCCATTCATTACACTTTCCTCTATGCACGTTCGGCCAATGATCGGA
GCTGAGGGAAACAACCTCAGTGATTCCTTGATGACGCACTCCAAGTGGAT
CAGTTCGTTAAACTGGAACATACTGACTTCATCAATATCCTCGGGAAGGT
CTTGTAGCTCTTCGTAGCACCGCTCTTGGACATCCGCATGCAGAGCCAAC
AATAACAGTGTAAAGATTAGACTGGTTGATGTGGTATCGTATCCCCCGAA
CATAAAGGTATTGACTTCTCCAAT
MXO02130.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:09:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14031-PA | 1530 | Cyp4ac3-RA | 928..1527 | 618..19 | 3000 | 100 | Minus |
| CG14032-PA | 1530 | Cyp4ac1-RA | 1393..1487 | 153..59 | 350 | 94.7 | Minus |
| CG14032-PA | 1530 | Cyp4ac1-RA | 1211..1247 | 335..299 | 135 | 94.5 | Minus |
| CG17970-PA | 1494 | Cyp4ac2-RA | 892..923 | 615..584 | 135 | 96.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:17:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp4ac3-RA | 1606 | CG14031-RA | 976..1575 | 618..19 | 3000 | 100 | Minus |
| Cyp4ac1-RA | 1666 | CG14032-RA | 964..1541 | 615..38 | 1165 | 80.1 | Minus |
| Cyp4ac2-RB | 1709 | CG17970-RB | 974..1552 | 615..37 | 660 | 74.3 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:17:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5269699..5270298 | 618..19 | 3000 | 100 | Minus |
| 2L | 23513712 | 2L | 5265197..5265774 | 615..38 | 1165 | 80.1 | Minus |
| 2L | 23513712 | 2L | 5267720..5268298 | 615..37 | 660 | 74.3 | Minus |
| 3L | 28110227 | 3L | 2476536..2476611 | 149..224 | 185 | 82.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:17:44 has no hits.
MXO02130.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:31 Download gff for
MXO02130.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14031-PA | 919..1530 | 18..624 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:47:14 Download gff for
MXO02130.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4ac3-RA | 967..1575 | 19..624 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:04:23 Download gff for
MXO02130.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4ac3-RA | 967..1575 | 19..624 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:04:23 Download gff for
MXO02130.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5269690..5270298 | 19..624 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:47:14 Download gff for
MXO02130.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5269690..5270298 | 19..624 | 99 | | Minus |
MXO02130.5prime Sequence
832 bp (733 high quality bases) assembled on 2007-01-19
> MXO02130.5prime
CAGTCGACATGTGGATCGCTCTGCTTGGGTCTTCACTTTTGATTGGGGCT
CTTTGGCTCCTGCTGAGACAACTTAATAAAACGTATTTTATTCTTTCATT
ATGCAAACGAGTGCGAACAGCGGATGGAAGTCCATTGGAAAGCAAAGTGT
TCGTTGTTCCCGGAAAAACGCGATTTGGCAACAATTTGGATCTACTCAAT
TTAACGCCAGCTAATATTTTTAGCTACATACGAGAGTCCACTGCCAAAGC
CAATGGACAAAATTATATATGGAATTTCCTATTTGCACCAGAATATAATA
TTGTTCGTGCCGAAGACGCTGAAGAAATATTTCAGAGCACCAAAATCACT
ACAAAGAATATGTCTTATGAATTGATAAGACCATTTCTTGGAGACGGGCT
GCTGATAAGCATAGACCAGAAATGGCACACAAGAAGAAAAACTTTGACCC
CAGCTTTTCATTTTAATATTCTGCAGTCTTTTCTCTCTATTTTTAAAGAA
GAGAGCAAAAAGTTTATCAAAATACTGGACAAGAACGTTGGCTTCGAGCT
TGAACTTAACCAGATAATTCCACAATTTACTCTAAACAATATTTGCGAAA
CTGCCCTAGGCGTAAAACTAGATGACATGTCGGAAGGAAACGAGTACAGA
AAGGCCATCCATGACTTTGAAATAGTTTTCAATCAGCGCATGTGCAATCC
GCTCATGTTCTTCAACTGGTACTTCTTCCTTTTCGGAGATTATAAAAAGT
ATTCCAGGATACTGCGTACAATTCACGGCTTCTCGAGCGGTATCATTCAA
CGCAAAAGGCAGCAATTCAAGCAGAAACAACT
MXO02130.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:10:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14031-PA | 1530 | Cyp4ac3-RA | 1..824 | 9..832 | 4120 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:44:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp4ac3-RA | 1606 | CG14031-RA | 49..872 | 9..832 | 4120 | 100 | Plus |
| Cyp4ac1-RA | 1666 | CG14032-RA | 34..857 | 9..832 | 1105 | 76.2 | Plus |
| Cyp4ac2-RB | 1709 | CG17970-RB | 137..669 | 102..634 | 395 | 72.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:44:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5269360..5269595 | 597..832 | 1180 | 100 | Plus |
| 2L | 23513712 | 2L | 5268797..5269003 | 208..414 | 1035 | 100 | Plus |
| 2L | 23513712 | 2L | 5268546..5268747 | 9..210 | 1010 | 100 | Plus |
| 2L | 23513712 | 2L | 5269192..5269300 | 489..597 | 530 | 99.1 | Plus |
| 2L | 23513712 | 2L | 5264855..5265090 | 597..832 | 430 | 78.8 | Plus |
| 2L | 23513712 | 2L | 5269051..5269135 | 412..496 | 425 | 100 | Plus |
| 2L | 23513712 | 2L | 5264034..5264216 | 9..191 | 300 | 77.6 | Plus |
| 2L | 23513712 | 2L | 5264319..5264496 | 234..411 | 290 | 77.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:44:20 has no hits.
MXO02130.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:31 Download gff for
MXO02130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14031-PA | 1..824 | 9..832 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:32 Download gff for
MXO02130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4ac3-RA | 49..872 | 9..832 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:30 Download gff for
MXO02130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4ac3-RA | 49..872 | 9..832 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:30 Download gff for
MXO02130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5268546..5268747 | 9..210 | 100 | -> | Plus |
| 2L | 5268800..5269003 | 211..414 | 100 | -> | Plus |
| 2L | 5269054..5269135 | 415..496 | 100 | -> | Plus |
| 2L | 5269200..5269300 | 497..597 | 100 | -> | Plus |
| 2L | 5269361..5269595 | 598..832 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:32 Download gff for
MXO02130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5268546..5268747 | 9..210 | 100 | -> | Plus |
| arm_2L | 5268800..5269003 | 211..414 | 100 | -> | Plus |
| arm_2L | 5269054..5269135 | 415..496 | 100 | -> | Plus |
| arm_2L | 5269200..5269300 | 497..597 | 100 | -> | Plus |
| arm_2L | 5269361..5269595 | 598..832 | 100 | | Plus |
