MXO02131.3prime Sequence
743 bp (714 high quality bases) assembled on 2007-01-19
> MXO02131.3prime
ATGGTCTAGAAAGCTTGCGAAGTCACCCACAGCATGGGAAACGAACTCAA
ACTGGCGCTCAATGCTGTTCTCCGACTCCAGTTCCAGTGCATCGTCGATG
AAGTGCATCTCGACGTGCTCGCGGAACGCATTGAAGGACACTTGGCTGGA
GTACTGCTTGCCGCACATAGGGCAGGTCTTCTCCATTGCGTCGGCTGCAT
CTGCTTTGATTTTCTCTTGTATTATGTTAATTCTCTGGCTGGGCGGCGTG
CCATTGTGTCCATTGTGTTGGCTCTCATAGTTCTTCAGCTCGCTGGTCAG
GCTGTCGTCCGTTTCCAGACTTTTGTCGGCCATCTCCGGTTTTTTGATGG
TTTTCTGGGCACATTCCGGACAGGGCTTGAGTGCTATGCGATTTTCTAGC
AGAGTCATTACCGATCTGAGCTCCTGCTGCTGCTTCATGGCCTCTCGCCT
CAGCTCCTGCAGTCCATCCAAACATCTTTTGGCATCCACATTGGCATCTG
GTTCACTAGTGGTTTCCTCCACCTTTTGCAGGTTGTAGGGGTAACCTAGT
TCCTCACTGCTGGCACCGAAGTCATCCAGGGCTATTTCCTCCAGACTGAG
ATCCTTAATGCCGTCGGAGAGCATCTTTTGGCGAAGGTGAGGATTGGGGG
AGTGCTGCGTAAAGGTCTTGGAGCGCACCAGGTTCTGGTTTTGCTGGGCT
CGCGAGTCTGTTGAGCTGGGCAGTGCGTTCAGCTGCTGATCCT
MXO02131.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:10:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12114-PA | 1095 | CG12114-RA | 368..1092 | 743..19 | 3625 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:18:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
spn-F-RB | 1465 | CG12114-RB | 484..1208 | 743..19 | 3625 | 100 | Minus |
spn-F-RA | 1465 | CG12114-RA | 484..1208 | 743..19 | 3625 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:18:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 31256036..31256402 | 385..19 | 1835 | 100 | Minus |
3R | 32079331 | 3R | 31255610..31255969 | 743..384 | 1800 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:18:20 has no hits.
MXO02131.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:31 Download gff for
MXO02131.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12114-PA | 368..1095 | 16..743 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:22 Download gff for
MXO02131.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
spn-F-RA | 484..1208 | 19..743 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:04:38 Download gff for
MXO02131.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
spn-F-RA | 484..1208 | 19..743 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:04:38 Download gff for
MXO02131.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 31255610..31255969 | 384..743 | 100 | -> | Minus |
3R | 31256038..31256402 | 19..383 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:22 Download gff for
MXO02131.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 27081332..27081691 | 384..743 | 100 | -> | Minus |
arm_3R | 27081760..27082124 | 19..383 | 100 | | Minus |
MXO02131.5prime Sequence
791 bp (683 high quality bases) assembled on 2007-01-19
> MXO02131.5prime
CAATCGACATGGAGGCATCTGCTGCCAAAATCACGCCTATGGCCAGTTCC
ATGTCCGCTTCCGGATCCACAAACTCCCCCTCCAGTGAAAAAATGAACTA
CGCACTGCAAGTGGCGCTGCAGACGATCAAGGAGCGGTGCATCCAGCTGC
AGCGCCGCGTGGCCAGCATGGAGGAGGAGAACCAGCAGCTAAGGGAGGCC
TCCAGCAGGTCGGAAGGTGCTCCAAGGGCAAACGAAATCGGGGTCACTGG
GGACGTCCTCTCTCTGAAAGCACAGGTCTCTGAGCTGCAGCGCCAAAAGG
AGCAGCTGGAGGAGCACATTGGCATGGTATCCAACGAGAACAGACGGCTC
TGGTCCCGCCTATCGCAGATCTCCAAGGATCAGCAGCTGAACGCACTGCC
CAGCTCAACAGACTCGCGAGCCCAGCAAAACCAGAACCTGGTGCGCTCCA
AGACCTTTACGCAGCACTCCCCCAATCCTCACCTTCGCCAAAAGATGCTC
TCCGACGGCATTAAGGATCTCAGTCTGGAGGAAATAGCCCTGGATGACTT
CGGTGCCAGCAGTGAGGAACTAGGTTACCCCTACAACCTGCAAAAGGTGG
AGGAAACCACTAGTGAACCAGATGCCAATGTGGATGCCAAAAGATGTTTG
GATGGACTGCAGGAGCTGAGGCGAGAGGCCATGAAGCAGCAGCAGGAGCT
CAGATCGGTAATGACTCTGCTAGAAGATCGCATAGCACTCAAGCCCCTGT
CGGAATGTGCCCAGAAACCATCAAAAAACCGGAGATGGCCG
MXO02131.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:10:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12114-PA | 1095 | CG12114-RA | 1..784 | 9..791 | 3780 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:18:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
spn-F-RB | 1465 | CG12114-RB | 117..900 | 9..791 | 3835 | 99.5 | Plus |
spn-F-RA | 1465 | CG12114-RA | 117..900 | 9..791 | 3835 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:18:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 31255243..31255969 | 9..735 | 3620 | 99.9 | Plus |
3R | 32079331 | 3R | 31256036..31256094 | 734..791 | 185 | 91.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:18:27 has no hits.
MXO02131.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:32 Download gff for
MXO02131.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12114-PA | 1..784 | 9..791 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:24 Download gff for
MXO02131.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
spn-F-RA | 113..900 | 1..791 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:04:43 Download gff for
MXO02131.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
spn-F-RA | 113..900 | 1..791 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:04:43 Download gff for
MXO02131.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 31255239..31255969 | 1..735 | 99 | -> | Plus |
3R | 31256038..31256094 | 736..791 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:24 Download gff for
MXO02131.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 27080961..27081691 | 1..735 | 99 | -> | Plus |
arm_3R | 27081760..27081816 | 736..791 | 94 | | Plus |