MXO02137.3prime Sequence
588 bp (559 high quality bases) assembled on 2007-01-19
> MXO02137.3prime
ATGGTCTAGAAAGCTTGCGACAAGTTTTGTGGTTATCTTCACAATCAGAA
TGAATCCCCAATCCACGGGATTCGTCAAGGTGAAATTGACCTTGTAGTAG
CCCTCGGGAACCATATCCGGAAAACCATCACTGTTTGCCACACACTTTTC
CAACACGTACGTATCCTGGGGCCACGGTGGCTCGAATTTGCCATCAAACT
TGATGAGATTGGAACAATCGCCCAGATTTGGTAGCACTACGTTCTTATAG
TGGCTGTTCATGAACTCAACATATGGCTGTTTCGGGATGCTAAACGGCAT
AATCTTGTAGTCATTTTCGTCCCCGGAGGTGCTTCGATAGGCCATTGCTT
CAACCATGGTATTATCTTCTGGTGTGTACTTAAATTCAATGTTGCCAGAA
AGGGCATATTCTCCCCTACCGACTCGCTCCACTTTGGCCGCAATCTTCAG
CTTAGTCTCATCCGTGGTATAGGTTTCAATGGACAGCGGTTCGTAGTCCC
ACTTGCGCTTGCCATTGCATTGATCAACTATCAAAAGTATTAATACTCCT
CCAATGATGGGCAGAAAGCAACGTGGTAGCATGTCGAC
MXO02137.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:11:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14502-PA | 567 | CG14502-RA | 19..564 | 564..19 | 2730 | 100 | Minus |
| CG14502-PB | 567 | CG14502-RB | 19..564 | 564..19 | 2730 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:25:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14502-RD | 711 | CG14502-RD | 30..593 | 582..19 | 2760 | 99.5 | Minus |
| CG14502-RC | 1269 | CG14502-RC | 588..1151 | 582..19 | 2760 | 99.5 | Minus |
| CG14502-RB | 2224 | CG14502-RB | 1543..2106 | 582..19 | 2760 | 99.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:25:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18294258..18294594 | 355..19 | 1685 | 100 | Minus |
| 2R | 25286936 | 2R | 18294010..18294166 | 509..353 | 785 | 100 | Minus |
| 2R | 25286936 | 2R | 18293875..18293949 | 582..508 | 315 | 94.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:25:46 has no hits.
MXO02137.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:36 Download gff for
MXO02137.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14502-PB | 1..567 | 16..582 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:29 Download gff for
MXO02137.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14502-RB | 1537..2106 | 19..588 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:58:53 Download gff for
MXO02137.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14502-RB | 1537..2106 | 19..588 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:58:53 Download gff for
MXO02137.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18293869..18293949 | 508..588 | 91 | -> | Minus |
| 2R | 18294012..18294164 | 355..507 | 100 | -> | Minus |
| 2R | 18294259..18294594 | 19..354 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:29 Download gff for
MXO02137.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14181374..14181454 | 508..588 | 91 | -> | Minus |
| arm_2R | 14181517..14181669 | 355..507 | 100 | -> | Minus |
| arm_2R | 14181764..14182099 | 19..354 | 100 | | Minus |
MXO02137.5prime Sequence
377 bp (372 high quality bases) assembled on 2007-01-19
> MXO02137.5prime
GCGGCCGCGACGTCCACATATACCTGCCGTTCACTATTATTTAGTGAAAT
GAGATATTATGATATTTTCTGAATTGTGATTAAAAAGGCAACTTTATGCC
CATGCAACAGAAACTATAAAAAATACAGAGAATGAAAAGAAACAGATAGA
TTTTTTAGTTCTTTAGGCCCGTAGTCTGCAAATCCTTTTATGATTTTCTA
TCAAACAAAAGAGGAAAATAGACCAGTTGCAATCCAAACGAGAGTCTAAT
AGAATGAGGTCGAAAAGTAAATCGCGCGGGTTTGTTACTGATAAAGCAGG
CAAGACCTAAAATGTGTAAAGGGCAAAGTGTATACTTTGGCGTCACCCCT
TACATATTTTAGGTCTTTTTTTATTGC
MXO02137.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-10 05:11:46 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 19:29:53 has no hits.
Blast to na_all.dmel.RELEASE6 performed on 2014-11-28 19:29:51 has no hits.
Blast to na_te.dros performed 2014-11-28 19:29:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| P-element | 2907 | P-element PPI251 2907bp AKA(V01520,X69493) Derived from X06779 (g58305) (Rel. 49, Last updated, Version 8). | 2084..2131 | 150..102 | 107 | 71.4 | Minus |
MXO02137.5prime Sim4 Records
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:20:32 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:20:32 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 22:39:37 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 22:39:37 has no hits.
