MXO02148.5prime Sequence
285 bp (210 high quality bases) assembled on 2007-01-19
> MXO02148.5prime
CAGTCGACATGGAACTGAGCTGGGAGATAGTGTTCTGCGTGGGCATTGCG
GTGCTGGTTCATGTTCTGGTCTACGTGTTCGTCATGGCCAAGAAACCGAG
GAGCATTGTGGGTCGTCATGTGGTGGTCACCGGCGGCTCCAAGGGAATCG
GACTCTGTCTGGCGGTGGAGTGCGCCATGAAAGGCGCCAATGTGACGGTG
ATAGCGCGCGACGAGAAAATGCTGAGCGGAGCAGTGGCTCTGATGGAAGT
GATTCGCCAGCGGCCAGATCAAAAGTTCCAGTACA
MXO02148.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:13:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10425-PA | 1011 | CG10425-RA | 1..277 | 9..285 | 1385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:45:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10425-RA | 1402 | CG10425-RA | 98..375 | 8..285 | 1390 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:45:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25262183..25262401 | 226..8 | 1095 | 100 | Minus |
| 3R | 32079331 | 3R | 25262054..25262113 | 285..226 | 300 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:45:31 has no hits.
MXO02148.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:42 Download gff for
MXO02148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10425-PA | 1..276 | 9..284 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:58 Download gff for
MXO02148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10425-RA | 91..374 | 1..284 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:35:43 Download gff for
MXO02148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10425-RA | 91..374 | 1..284 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:35:43 Download gff for
MXO02148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25262055..25262113 | 226..284 | 100 | <- | Minus |
| 3R | 25262184..25262404 | 1..225 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:58 Download gff for
MXO02148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21087777..21087835 | 226..284 | 100 | <- | Minus |
| arm_3R | 21087906..21088126 | 1..225 | 98 | | Minus |
