MXO02153.3prime Sequence
839 bp (704 high quality bases) assembled on 2007-01-19
> MXO02153.3prime
ATGGTCTAGAAAGCTTGCATGGTTGGCAGTTTTGTTAATCTTTTCCTTGT
CGTCACTATCATTCTCATTGTCATCGGTCTCTTGATCCTTATCCGTGTCG
GTTTTGTTATCGTTATTATCCTGCGCTTGCTGCAGAGCCTTTTGAGCAGC
GCGATCTTGTTGTGATTTTTCCCAGGCCAGCTCAAAGGGATACTCCAAGG
GTTTCAGTTCGTCGGGGCACTCCTCCTGATTCGGAGCAGTGGCTTGGCTA
ATGGAAGCGCCACGCGTGTGGATCTGCTCCAGCTGAGCGGCGGTGTGGAC
CTCTGAATTGAGACCCGTAATAAACTCGAACAACTGCTCCTTGGTGTAAA
TGTTGGGCAGGCCGCGTCGTTCAAAGAAGTTAACAATGTTGCCGCAATCC
CTCATCAGGAACTCCAGGGCACTGGGATGCTTCGGTTCGACACTCTGGGC
CACGTCAATAAACCAGCACTTGCCCTCGAACCAGAGTATGTTATATTCGC
TCATATCGGCGTGCACCAGCTTCGCCTCATTGTACAACTTGTGCATCGCG
GCCACAATCTCTTCGTAGGCGCAACTCAGCTCCGCGTCGCTCAGACGGGC
ATCCTTTAACTTGGGCGCAGCGTTATGATTGTCACCGATGAACCGCATTA
CCAGCACGTGCTTCTTCAGCACAACAACGTCTGGAACGTTTAGGCCAATG
GCTTGCATCCTCATCAGATTATGCATCTCCTTCTCGGCCCACATATTGAT
AATCACTCGGTGGTTTTGTTTGCTAAAGCGATCCTTGAACCGATAGTCAT
CCTTGATGTATCTATCGCGCTGCTTGAACTCGTTGAGCG
MXO02153.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:14:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3008-PA | 1812 | CG3008-RA | 989..1809 | 839..19 | 4105 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3008-RA | 2263 | CG3008-RA | 1280..2100 | 839..19 | 4105 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4884686..4885506 | 839..19 | 4105 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:51:20 has no hits.
MXO02153.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:44 Download gff for
MXO02153.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3008-PA | 989..1812 | 16..839 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:43:31 Download gff for
MXO02153.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3008-RA | 1280..2111 | 7..839 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:03 Download gff for
MXO02153.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3008-RA | 1280..2111 | 7..839 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:03 Download gff for
MXO02153.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4884686..4885517 | 7..839 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:43:31 Download gff for
MXO02153.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4884686..4885517 | 7..839 | 99 | | Minus |
MXO02153.5prime Sequence
859 bp (692 high quality bases) assembled on 2007-01-19
> MXO02153.5prime
CAGTCGACATGTCGTCGCCATGGGTTAAGACCAGCGAGCCTGTGCAGCAG
GTGAATCTGGCGGATATAATGTCGGAGCAATATGCCCACAAGTTGCACGA
CAAGGAGCTGCAGCGCCACACGGAGAAGCTGAAAAGACCGGACGAACAGA
TAGCACCCGTTTGGGGGTCGCAAGCCTCATCCCCGCCAGCGCCCAATGCG
CAGAGTATCCAAAGTGATGCGGAGGATTGGGAGGATTACTCTGCGCTCCT
CAATGACGAAGGAAACGTAGCGGAGGACATTCAGCTGCCGGAAGACAGCG
ATGCAGTTATTGCCCAGCTGTTGCAGTCCCAGTTCGATCACGAGTACAAT
GAGGAATTGCGTCGTATCGAGCGGCAGCAAAACAAGCAATCCAAGGTCAC
TGTTACCCTCAATAAGTTCCTACGTGATGGCGATGCAGAGTTCTTGCACG
ACACCGCGGAAGATGACTACGAAGAGGATGAATTGGAGCAACAGAAGCAC
GACTGGGATCGGTTCGAGGACAATGAACGGCAGCTTGACTCCATACCTCG
CTGCGGCTTTAAAGTTAACAAGGAGGGCGAGATGATAACAAAGCACGATC
CGCAGCTGTGCGCCGTGCGTAATGCCCAGCGCGTGATGTCCTTTCCGCCG
GAGTTTCCCACCGGTGATGCTGCCGGTTTCGACATGAAGCTCTCCAATAA
GGTGTTTAACCAACTACGAGCCCATTCTCGACGAGGCCGCTCCGACAAGC
ACGAGAAAGTGGCCACCGCGGAGATGGGATTGGATGCGGGTACACGTTTG
CTGCTGTACAAGCTGATCAATAACCAATACTGAAGCAGATCAACGGCATT
ATATCCACG
MXO02153.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:14:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3008-PA | 1812 | CG3008-RA | 1..852 | 9..859 | 4195 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:48:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3008-RA | 2263 | CG3008-RA | 292..1143 | 9..859 | 4220 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:48:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4883647..4884341 | 9..703 | 3475 | 100 | Plus |
| 2L | 23513712 | 2L | 4884389..4884549 | 700..859 | 740 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:48:57 has no hits.
MXO02153.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:44 Download gff for
MXO02153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3008-PA | 1..852 | 9..859 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:05 Download gff for
MXO02153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3008-RA | 285..1143 | 1..859 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:33:48 Download gff for
MXO02153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3008-RA | 285..1143 | 1..859 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:33:48 Download gff for
MXO02153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4883643..4884339 | 1..701 | 99 | -> | Plus |
| 2L | 4884391..4884549 | 702..859 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:05 Download gff for
MXO02153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4883643..4884339 | 1..701 | 99 | -> | Plus |
| arm_2L | 4884391..4884549 | 702..859 | 98 | | Plus |
