MXO02155.3prime Sequence
838 bp (659 high quality bases) assembled on 2007-01-19
> MXO02155.3prime
ATGGTCTAGAAAGCTTGCGTACCATTTGGACTCCTCCTTGTCAGCGAGCA
GAGGTCTCCGCACCGCATCCCCACCATCGAGATGGTGGGGACCACGACTG
CCATTGTCGTCCTTTCCAGACAGTCGCTGGTACTGGCTTCCCTCTCTGCT
GGGCCACCTGACCAGTGGTATGCCGGCATCAGGGCAGAAGATGGAGGGAT
AGTATTGTGTGTAGCTTATATAGCCTGCAAACAGGCCAATCAGCCCGCCG
ATGGTCACATCCTGCCAGTGGTGGTGGTAGTCGCAGGTGCGACTAACTGC
AACCAGCAGTGCGATAAACAGAGGTATCACAGCGATGCAGAGCCGCCTGT
CTCTTGTGTACCAGTAGAAGGCGATAGTGACCAGAAAGGGAGCCACTATC
ACCCAGAAGAGCAGCTCCCCGCCCCTGACAATGTCCGGTCGCCTTGGGTT
CTTGTATAGCCACAGCTCTTCCTCGTGGATTTCCCGTTTGAATGCTGTCA
TCGTCTCCAACTTGAAGAAGGTAATGACGAGGAGAACGCGAAGAACAACA
TCTACGGCATCGCTGAGCTTCGCATTAGAGTTTCCTGTTCTGTGGCTTCG
TTCCTCTCGCTTTTCTGGCTGAACGGAGCTGCTGTCCGTGTTCATAGCAA
GTTCATTGCGCCACATTTCGTCGTCGTTGGTCCTGGTCCTCGATCCTGTA
TTCCTGACGTCCTCTGCGGAACTGTCGCTGAGGGTTCGCCTGGATTCTTG
ACCTTCCTTGCTCGCACCCATTTCGTTAGTCCGTTGGGTATATTCGGTTG
TCAGCTTAGGCCTGGTGCTTGTCGCCTGCTCCTTGCCT
MXO02155.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:14:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12746-PA | 903 | CG12746-RA | 81..900 | 838..19 | 4050 | 99.7 | Minus |
CG12746-PC | 1239 | CG12746-RC | 81..576 | 838..343 | 2430 | 99.5 | Minus |
CG12746-PB | 1092 | CG12746-RB | 6..429 | 766..343 | 2120 | 100 | Minus |
CG12746-PD | 1092 | CG12746-RD | 6..429 | 766..343 | 2120 | 100 | Minus |
CG12746-PC | 1239 | CG12746-RC | 908..1236 | 347..19 | 1645 | 100 | Minus |
CG12746-PB | 1092 | CG12746-RB | 761..1089 | 347..19 | 1645 | 100 | Minus |
CG12746-PD | 1092 | CG12746-RD | 761..1089 | 347..19 | 1645 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:17:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12746-RE | 1509 | CG12746-RE | 276..771 | 838..343 | 2450 | 99.6 | Minus |
CG12746-RD | 1381 | CG12746-RD | 161..643 | 825..343 | 2385 | 99.6 | Minus |
CG12746-RB | 1339 | CG12746-RB | 119..601 | 825..343 | 2385 | 99.6 | Minus |
CG12746-RE | 1509 | CG12746-RE | 1103..1431 | 347..19 | 1645 | 100 | Minus |
CG12746-RD | 1381 | CG12746-RD | 975..1303 | 347..19 | 1645 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:17:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 5567029..5567357 | 347..19 | 1645 | 100 | Minus |
3R | 32079331 | 3R | 5566086..5566398 | 827..515 | 1535 | 99.4 | Minus |
3R | 32079331 | 3R | 5566467..5566638 | 514..343 | 860 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:17:52 has no hits.
MXO02155.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:46 Download gff for
MXO02155.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12746-PA | 81..903 | 15..838 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:47:17 Download gff for
MXO02155.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12746-RE | 276..773 | 342..838 | 99 | <- | Minus |
CG12746-RE | 1109..1441 | 10..341 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:04:27 Download gff for
MXO02155.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12746-RE | 276..773 | 342..838 | 99 | <- | Minus |
CG12746-RE | 1109..1441 | 10..341 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:04:27 Download gff for
MXO02155.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5566467..5566640 | 342..514 | 98 | <- | Minus |
3R | 5566086..5566398 | 515..827 | 99 | -> | Minus |
3R | 5567035..5567367 | 10..341 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:47:17 Download gff for
MXO02155.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1392757..1393089 | 10..341 | 99 | | Minus |
arm_3R | 1391808..1392120 | 515..827 | 99 | -> | Minus |
arm_3R | 1392189..1392362 | 342..514 | 98 | <- | Minus |
MXO02155.5prime Sequence
851 bp (700 high quality bases) assembled on 2007-01-19
> MXO02155.5prime
CAGTCGACATGCCCGATAGTTGTACGGCGGACCTACGAAGTCGCCGCCGC
GAAAATCCAATCGACCGCAACGGCAATATTGGCGGCACAGGCAAGGAGCA
GGCGACAAGCACCAGGCCTAAGCTGACAACCGAATATACCCAACGGACTA
ACGAAATGACTGCGAGCAAGGAAGGTCAAGAATCCAGGCGAACCCTCAGC
GACAGTTCCGCAGAGGACGTCAGGAATACAGGATCGAGGACCAGGACCAA
CGACGACGAAATGTGGCGCAATGAACTTGCTATGAACACGGACAGCAGCT
CCGTTCAGCCAGAAAAGCGAGAGGAACGAAGCCACAGAACAGGAAACTCT
AATGCGAAGCTCAGCGATGCCGTAGATGTTGTTCTTCGCGTTCTCCTCGT
CATTACCTTCTTCAAGTTGGAGACGATGACAGCATTCAAACGGGAAATCC
ACGAGGAAGAGCTGTGGCTATACAAGAACCCAAGGCGACCGGACATTGTC
AGGGGCGGGGAGCTGCTCTTCTGGGTGATAGTGGCTCCCTTTCTGGTCAC
TATCGCCTTCTACTGGTACACAAGAGACAGGCGGCTCTGCATCGCTGTGA
TACCTCTGTTTATCGCACTGCTGGTTGCAGTTAGTCGCACCTGCGACTAC
CACCACCACTGGCAGGATGTGACCATCGGCGGGCTGATTGGCCTGTTTGC
AGGCTATATAAGCTACACACAATACTATCCCTCCATCTTCTGCCCTGATG
CCGGCATACCACTGGTCAGGTGGCCCAGCAGAGAGGGAAGCCAGTACCAG
CGACTGTCTGGAAAGGACGACAATGGCAGTCGTGGTCGCCACCATCTCGA
T
MXO02155.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:14:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12746-PA | 903 | CG12746-RA | 1..843 | 9..851 | 4190 | 99.8 | Plus |
CG12746-PC | 1239 | CG12746-RC | 1..576 | 9..584 | 2880 | 100 | Plus |
CG12746-PB | 1092 | CG12746-RB | 1..429 | 156..584 | 2145 | 100 | Plus |
CG12746-PD | 1092 | CG12746-RD | 1..429 | 156..584 | 2145 | 100 | Plus |
CG12746-PC | 1239 | CG12746-RC | 908..1179 | 580..851 | 1335 | 99.6 | Plus |
CG12746-PB | 1092 | CG12746-RB | 761..1032 | 580..851 | 1335 | 99.6 | Plus |
CG12746-PD | 1092 | CG12746-RD | 761..1032 | 580..851 | 1335 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12746-RE | 1509 | CG12746-RE | 196..771 | 9..584 | 2880 | 100 | Plus |
CG12746-RD | 1381 | CG12746-RD | 161..643 | 102..584 | 2415 | 100 | Plus |
CG12746-RB | 1339 | CG12746-RB | 119..601 | 102..584 | 2415 | 100 | Plus |
CG12746-RE | 1509 | CG12746-RE | 1103..1374 | 580..851 | 1345 | 99.6 | Plus |
CG12746-RD | 1381 | CG12746-RD | 975..1246 | 580..851 | 1345 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 5566086..5566398 | 100..412 | 1565 | 100 | Plus |
3R | 32079331 | 3R | 5567029..5567300 | 580..851 | 1345 | 99.6 | Plus |
3R | 32079331 | 3R | 5566467..5566638 | 413..584 | 860 | 100 | Plus |
3R | 32079331 | 3R | 5565361..5565454 | 9..102 | 470 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:51:35 has no hits.
MXO02155.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:46 Download gff for
MXO02155.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12746-PA | 1..843 | 9..851 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:43:38 Download gff for
MXO02155.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12746-RE | 190..773 | 3..585 | 99 | <- | Plus |
CG12746-RE | 1109..1374 | 586..851 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:12 Download gff for
MXO02155.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12746-RE | 190..773 | 3..585 | 99 | <- | Plus |
CG12746-RE | 1109..1374 | 586..851 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:12 Download gff for
MXO02155.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5567030..5567300 | 581..851 | 99 | | Plus |
3R | 5565355..5565453 | 3..101 | 97 | -> | Plus |
3R | 5566088..5566398 | 102..412 | 100 | -> | Plus |
3R | 5566467..5566634 | 413..580 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:43:38 Download gff for
MXO02155.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1392189..1392356 | 413..580 | 100 | -> | Plus |
arm_3R | 1391077..1391175 | 3..101 | 97 | -> | Plus |
arm_3R | 1391810..1392120 | 102..412 | 100 | -> | Plus |
arm_3R | 1392752..1393022 | 581..851 | 99 | | Plus |