MXO02159.3prime Sequence
588 bp (538 high quality bases) assembled on 2007-01-19
> MXO02159.3prime
ATGGTCTAGAAAGCTTGCCGTCAAGTCTTCATCCTCCTTGGTTGTGAACT
GGAACACTTCGTAGTGATGGTTGAGTTCCCGCACCGAATGCAGTTGGAAT
CTCGTGGCTAGAGCTCCGTTTTCAGAGTTCTTAACGAAAAATACTCTTTT
CGCCCTGCTATGTACCAGGGCCATGGAGCACATAAGGCAGGGTTCCTGCA
GCAGATAGATATCGTAGCCGGTGCACAGATAGGGTCCGAATTTGGCCAGG
TTATCTGCTCCTTGAACTGCGTCCACTTCTTTGCATTCTCTCGACTTTTC
CGCTCCGAATGTCAGGTCTTTGTAGTCTTCATTGTTCATCAGGTAATCGT
AGTAGGCTTTAGGAATACCCCGCAGAGTGGTATCCTTCTTGAAATCTTCG
GTGAATGTAACCTCCGTTTTTGTGGCGCCTCCTTCTTGACTGCGAGCCAC
AAAATCGACGAGCATCATGCAGCAGTGCTCGTGCGGCCTACAAACTTCAC
CAGTTCCAGCAATGGACACAATGCTGGGTTGTCGCGGATCCACGCAGATG
CCCACCGGACGATTGGCATTGACATCCCGCGAGAGCCT
MXO02159.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:15:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10927-PA | 1083 | CG10927-RA | 511..1080 | 588..19 | 2850 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:25:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10927-RA | 1166 | CG10927-RA | 548..1117 | 588..19 | 2850 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:25:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18613637..18614206 | 588..19 | 2850 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:25:53 has no hits.
MXO02159.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:49 Download gff for
MXO02159.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-PA | 511..1083 | 15..588 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:35 Download gff for
MXO02159.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-RA | 548..1124 | 10..588 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:58:56 Download gff for
MXO02159.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-RA | 548..1124 | 10..588 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:58:56 Download gff for
MXO02159.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18613637..18614213 | 10..588 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:35 Download gff for
MXO02159.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14501142..14501718 | 10..588 | 99 | | Minus |
MXO02159.5prime Sequence
827 bp (776 high quality bases) assembled on 2007-01-19
> MXO02159.5prime
CAGTCGACATGGATATATCCGCGCCACCAAACAAACGTGCTCGAAAATCA
CCCAATCTGGATGAAGACATAACTGGGATCCGGGCCATCCTCTCCGATGA
GTTCGACGAGGATATTGCGCTCATCAAGGCGCACAGTTGCGAGTTGGAGA
CGAAACAGCAGCTCCAGGCGGTCATCCAGGAGCTCTCACAGAAATTGCCC
CACTTTCAACACCTAAAGCGCGTCCAGGATCGCAGCGTGCTCATATGTCC
CAGCTCAGAGATCGGAGTGTCTCAAAGCCTGGAACAACACCTTGAACAGT
TTGCCTTTTCGGAGCACGTGCTCCGTGCTTTGTGCCAGGGAGTCCGGGTG
GTGGAGGTGCCGGAACGGATGCCCCGACTGCGGGTGCAGTACGAGAAGAC
CCTTAAGCACTGGCCCTGCAAGTTTCACCCTAATCACTACTCGGAGTCAC
TGAGGAATGGCAGCAACTTTAGCTCCGCACAACGCACATTTCACAAAAGG
ATCGGGCAATTGCTTGTGAGGCTCTCGCGGGATGTCAATGCCAATCGTCC
GGTGGGCATCTGCGTGGATCCGCGACAACCCAGCATTGTGTCCATTGCTG
GAACTGGTGAAGTTTGTAGGCCGCACGAGCACTGCTGCATGATGCTCGTC
GATTTTGTGGCTCGCAGTCAAGAAGGAGGCGCCACAAAAACGGAGGTTAC
ATTCACCGAAGATTTCAAGAAGGATACCACTCTGCGGGGTATTCCTAAAG
CCTACTACGATTACCTGATGAACAATGAAGACTACAAAGACCTGACATTC
GGAGCGGAAAAGTCGAGAGAATGCAAA
MXO02159.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:15:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10927-PA | 1083 | CG10927-RA | 1..819 | 9..827 | 4095 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:33:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10927-RA | 1166 | CG10927-RA | 38..856 | 9..827 | 4095 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:33:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18613127..18613945 | 9..827 | 4095 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:33:19 has no hits.
MXO02159.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:49 Download gff for
MXO02159.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-PA | 1..816 | 9..824 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:28:27 Download gff for
MXO02159.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-RA | 38..853 | 9..824 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:16:42 Download gff for
MXO02159.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-RA | 38..853 | 9..824 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:16:42 Download gff for
MXO02159.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18613127..18613942 | 9..824 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:28:27 Download gff for
MXO02159.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14500632..14501447 | 9..824 | 100 | | Plus |
