MXO02160.3prime Sequence
354 bp (354 high quality bases) assembled on 2007-01-19
> MXO02160.3prime
ATGGTCTAGAAAGCTTGCTCCCACGGCGCTGGTATAGCCGCGCACCATGA
GGTAGCCATTGACGATGTCCGAGGGCATGTGCTGCATGGACGCGTACTCG
TCGGCGCTGGCGAACCTTAGTTTCGTGTGCGGATCGGCATAAGGAGCGGG
CAGACCGCTGATATCCGAGTACTTCTTGGCCGGAACCAACGAGGGCGGTG
CATTGAGCGTGAAGTAGGTGGGTTGTTCGGCGGACAGCTTCTGGCTACGC
TCCATGTTGCTTATCTGACGTAGAGGGCGGTAAACACAGTTCTTTGGAAA
GGTAAACGGACGCTTAAAGGAGCGTTTAGGCTTCGCATTTTGTTCCATGT
CGAC
MXO02160.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:15:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12659-PB | 333 | CG12659-RB | 1..330 | 348..19 | 1650 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:19:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12659-RC | 896 | CG12659-RC | 36..365 | 348..19 | 1650 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:19:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8591306..8591502 | 19..215 | 985 | 100 | Plus |
| X | 23542271 | X | 8591562..8591694 | 216..348 | 665 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:19:04 has no hits.
MXO02160.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:50 Download gff for
MXO02160.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12659-PB | 1..333 | 18..348 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:35 Download gff for
MXO02160.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12659-RC | 29..371 | 10..354 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:04:57 Download gff for
MXO02160.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12659-RC | 29..371 | 10..354 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:04:57 Download gff for
MXO02160.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8591300..8591502 | 10..215 | 98 | <- | Plus |
| X | 8591562..8591699 | 216..354 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:35 Download gff for
MXO02160.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8485333..8485535 | 10..215 | 98 | <- | Plus |
| arm_X | 8485595..8485732 | 216..354 | 97 | | Plus |
MXO02160.5prime Sequence
820 bp (760 high quality bases) assembled on 2007-01-19
> MXO02160.5prime
GCGGCCGCGACGTCCACATATACCTGCCGTTCACTATTATTTAGTGAAAT
GAGATATTATGATATTTTCTGAATTGTGATTAAAAAGGCAACTTTATGCC
CATGCAACAGAAACTATAAAAAATACAGAGAATGAAAAGAAACAGATAGA
TTTTTTAGTTCTTTAGGCCCGTAGTCTGCAAATCCTTTTATGATTTTCTA
TCAAACAAAAGAGGAAAATAGACCAGTTGCAATCCAAACGAGAGTCTAAT
AGAATGAGGTCGAAAAGTAAATCGCGCGGGTTTGTTACTGATAAAGCAGG
CAAGACCTAAAATGTGTAAAGGGCAAAGTGTATACTTTGGCGTCACCCCT
TACATATTTTAGGTCTTTTTTTATTGTGCGTAACTAACTTGCCATCTTCA
AACAGGAGGGCTGGAAGAAGCAGACCGCTAACACAGTACATAAAAAAGGA
GACATGAACGATGAACATCAAAAAGTTTGCAAAACAAGCAACAGTATTAA
CCTTTACTACCGCACTGCTGGCAGGAGGCGCAACTCAAGCGTTTGCGAAA
GAAACGAACCAAAAGCCATATAAGGAAACATACGGCATTTCCCATATTAC
ACGCCATGATATGCTGCAAATCCCTGAACAGCAAAAAAATGAAAAATATA
AAGTTCCTGAGTTCGATTCGTCCACAATTAAAAATATCTCTTCTGCAAAA
GGCCTGGACGTTTGGGACAGCTGGCCATTACAAAACACTGACGGCACTGT
CGCAAACTATCACGGCTACCACATCGTCTTTGCATTAGCCGGAGATCCTA
AAAATGCGGATGACACATCG
MXO02160.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-10 05:16:04 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 22:18:00 has no hits.
Blast to na_all.dmel.RELEASE6 performed on 2014-11-28 22:17:58 has no hits.
Blast to na_te.dros performed on 2014-11-28 22:17:59 has no hits.
MXO02160.5prime Sim4 Records
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 23:04:30 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 23:04:30 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 00:47:19 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 00:47:19 has no hits.
