Clone Sequence Records
MXO02168.3prime Sequence
838 bp (703 high quality bases) assembled on 2007-01-19
> MXO02168.3prime
ATGGTCTAGAAAGCTTGCGTTTTTGCCCTTCTCCACACGGCCCGCCTTGA
CTCCATTGAGCTTCGGTTTGGTCTCCTGCTTGGCGGCGGGCTTCTTGGAC
TTCTTTTTCTTCTTCTCGAAGGCGCTGAAGTCAACAGTGTCGGAGTCGTC
CTCGTTGCCGTACTTCTCCATCAGGCGGTCCATTAGGGAGCCAAAGTTTG
ACTCGCGCTGATTGCGACGTGCCAGGATCATTTGCTGCAAATCGCCACCG
TTGTCGGCTAAATCCTGGTCGTCCTTCTCCTTCTGGCGGCGCTTCAAACG
CTCCTTGATCACCTTGGCCTCCTTGAATTCGCGCGCGTACTTCTGGTGGC
GCTTCTTGCGCTTGGCTGCCGGCTCCTCGGTAAAGATCTTGTACTCGGGC
ACCTCGCCGCTGGCAATCATATCCTGAACGATCTTCTGAATGCGCGGCTC
GTCCTCCACCTTCATGAAGGGCACATGGTTCATCAGATAGTTGATGCAAC
CCTTGCCGCCCAGATACGCCTTTTTCAGATCGGTGCGCTCCAGCTCCGAT
TCCACATACTCCTTTTCATAGTTGTTGATATCCTCCTCGGTGATGGGCTT
GAAGATTTTGCTCCACAACTCCAGCCACGACGACAGCTTGGACTCGCTCT
CATCGTCGTCGTCGATCACGCCCTGCTCGTCGTACAGCGCCCGCTTCTGC
GTGTCCGTAAGCACCTGGTAGAGCTTCGATAGCACCTTGAACTTCTCGGT
GGACTCCGCCTTCTGCTCCTCCGGCACTCGATCGGGATGAACGAGCAGCG
AGAGCTTGTGGTATGCCTTCTTCACCTCCTTCTCGCCG
MXO02168.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:17:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6693-PA | 900 | CG6693-RA | 78..897 | 838..19 | 4075 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6693-RB | 1250 | CG6693-RB | 191..1010 | 838..19 | 4085 | 99.9 | Minus |
CG6693-RA | 1372 | CG6693-RA | 313..1132 | 838..19 | 4085 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:22:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11220508..11221327 | 19..838 | 4085 | 99.9 | Plus |
Blast to na_te.dros performed 2014-11-28 19:22:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsub\bilbo | 5540 | Dsub\bilbo 5540bp Derived from U73803 (Rel. 54, Last updated, Version 1). | 2061..2096 | 606..641 | 108 | 77.8 | Plus |
MXO02168.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:54 Download gff for
MXO02168.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6693-PA | 78..900 | 18..838 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:09 Download gff for
MXO02168.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6693-RA | 313..1132 | 19..838 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:28 Download gff for
MXO02168.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6693-RA | 313..1132 | 19..838 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:28 Download gff for
MXO02168.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11220508..11221327 | 19..838 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:09 Download gff for
MXO02168.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 7046230..7047049 | 19..838 | 99 | | Plus |
MXO02168.5prime Sequence
845 bp (707 high quality bases) assembled on 2007-01-19
> MXO02168.5prime
CAGTCGACATGTCGACGCTGGAGCTGTGCGAAAAGTATTTTGGGACGCGC
GATGTGTACAAGCTAATGGAGCTGGCCCGGGGCGCCGGCGAGAAGGAGGT
GAAGAAGGCATACCACAAGCTCTCGCTGCTCGTTCATCCCGATCGAGTGC
CGGAGGAGCAGAAGGCGGAGTCCACCGAGAAGTTCAAGGTGCTATCGAAG
CTCTACCAGGTGCTTACCGACACGCAGAAGCGGGCGCTGTACGACGAGCA
GGGCGTGATCGACGACGACGATGAGAGCGAGTCCAAGCTGTCGTCGTGGC
TGGAGTTGTGGAGCAAAATCTTCAAGCCCATCACCGAGGAGGATATCAAC
AACTATGAAAAGGAGTATGTGGAATCGGAGCTGGAGCGCACCGATCTGAA
AAAGGCGTATCTGGGCGGCAAGGGTTGCATCAACTATCTGATGAACCATG
TGCCCTTCATGAAGGTGGAGGACGAGCCGCGCATTCAGAAGATCGTTCAG
GATATGATTGCCAGCGGCGAGGTGCCCGAGTACAAGATCTTTACCGAGGA
GCCGGCAGCCAAGCGCAAGAAGCGCCACCAGAAGTACGCGCGCGAATTCA
AGGAGGCCAAGGTGATCAAGGAGCGTTTGAAGCGCCGCCAGAAGGAGAAG
GACGACCAGGATTTAGCCGACAACGGTGGCGATTTGCAGCAAATGATCCT
GGCACGTCGCAATCAGCGCGAGTCAAACTTTGGCTCCCTAATGGACCGCC
TGATGGAGAAGTACGGCAACGAGGACGACTCCGACACTGTTGACTTCAGC
GCCTTCGAGAAGAAAAAAAGAAGTCCAAGAAGCCCGCCGCCAAGC
MXO02168.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:17:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6693-PA | 900 | CG6693-RA | 1..838 | 9..845 | 4150 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6693-RB | 1250 | CG6693-RB | 114..951 | 9..845 | 4165 | 99.9 | Plus |
CG6693-RA | 1372 | CG6693-RA | 236..1073 | 9..845 | 4165 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11220567..11221404 | 845..9 | 4140 | 99.9 | Minus |
Blast to na_te.dros performed 2014-11-28 19:51:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsub\bilbo | 5540 | Dsub\bilbo 5540bp Derived from U73803 (Rel. 54, Last updated, Version 1). | 2061..2096 | 318..283 | 108 | 77.8 | Minus |
MXO02168.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:54 Download gff for
MXO02168.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6693-PA | 1..838 | 9..845 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:43:46 Download gff for
MXO02168.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6693-RA | 231..1073 | 1..845 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:16 Download gff for
MXO02168.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6693-RA | 231..1073 | 1..845 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:16 Download gff for
MXO02168.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11220567..11221408 | 1..845 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:43:46 Download gff for
MXO02168.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 7046289..7047130 | 1..845 | 99 | | Minus |