MXO02174.5prime Sequence
769 bp (697 high quality bases) assembled on 2007-01-19
> MXO02174.5prime
CAGTCGACATGGAGAAGAGAATAGAACTGGAAAGACGCGCACGCAAAGTA
AATCAGATCACAGAGCTGAATCTGGACAACTGCCGTAGTACAAGCATCGT
TGGCCTTACAGATGAATACACAGCCTTGGAATCGCTTAGCTTGATCAACG
TGGGTCTCACCACACTGAAAGGTTTCCCCAAGCTGCCCAATTTAAAGAAG
CTCGAACTGTCCGACAATCGGATTTCGAGTGGCCTCAACTATCTGACCAC
TAGCCCCAAACTGCAATATCTCAACTTGTCTGGCAACAAGATAAAGGATC
TGGAAACCCTGAAGCCCCTGGAGGAGTTTAAAAATCTGGTTGTTCTGGAT
TTGTTTAATAACGACGCTACTCAAGTGGATAATTACCGCGAGAAGATCTT
CAAGATGTTGCCATCGTTAAATTTCCTAGATGGATTTGATTGCAACGACG
AGGAGGTGCAATCTGATGGCGATGATGATGATGAGGTCAACGGCAACGAT
TCCGACGAAGTGGGAGTTTCCGACGAAGATGACGACAGCGATGATAGCGA
CGAAGAGGCGAATGGTGAAGTGTCCCTGTCGGAGGTGTACAATGACGATT
TGGAAGAGGATAACTCTGATTGGGAAGGCGAAGACGAGGCTGGCGAGGAG
GACGAGGAAGAGGATTCCGATATTGATGATGCCGATGGTGATGCAAACGA
ATCGGCTGCATCAGTGAATGCCAAGGACAAGGATGGCGAAANAGGAAGCA
GACGAGTCGCAAGTCAGAA
MXO02174.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:18:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5784-PB | 786 | Mapmodulin-RB | 1..759 | 9..768 | 3760 | 99.8 | Plus |
| CG5784-PA | 786 | Mapmodulin-RA | 1..759 | 9..768 | 3760 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mapmodulin-RA | 2073 | CG5784-RA | 397..1155 | 9..768 | 3775 | 99.9 | Plus |
| Mapmodulin-RB | 2145 | CG5784-RB | 328..1086 | 9..768 | 3775 | 99.9 | Plus |
| Mapmodulin-RD | 2379 | CG5784-RD | 397..904 | 9..516 | 2540 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17868432..17868810 | 433..55 | 1895 | 100 | Minus |
| 2R | 25286936 | 2R | 17867335..17867561 | 741..515 | 1135 | 100 | Minus |
| 2R | 25286936 | 2R | 17868287..17868370 | 516..433 | 420 | 100 | Minus |
| 2R | 25286936 | 2R | 17871329..17871376 | 56..9 | 240 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:51:56 has no hits.
MXO02174.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:57 Download gff for
MXO02174.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5784-PA | 1..758 | 9..767 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:43:51 Download gff for
MXO02174.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mapmodulin-RB | 323..1086 | 1..769 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:21 Download gff for
MXO02174.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mapmodulin-RB | 323..1086 | 1..769 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:21 Download gff for
MXO02174.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17867236..17867253 | 752..769 | 94 | <- | Minus |
| 2R | 17867326..17867559 | 517..751 | 99 | <- | Minus |
| 2R | 17868287..17868369 | 434..516 | 100 | <- | Minus |
| 2R | 17868432..17868808 | 57..433 | 100 | <- | Minus |
| 2R | 17871329..17871381 | 1..56 | 92 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:43:51 Download gff for
MXO02174.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13754741..13754758 | 752..769 | 94 | <- | Minus |
| arm_2R | 13754831..13755064 | 517..751 | 99 | <- | Minus |
| arm_2R | 13755792..13755874 | 434..516 | 100 | <- | Minus |
| arm_2R | 13755937..13756313 | 57..433 | 100 | <- | Minus |
| arm_2R | 13758834..13758886 | 1..56 | 92 | | Minus |
