MXO02175.3prime Sequence
807 bp (726 high quality bases) assembled on 2007-01-19
> MXO02175.3prime
ATGGTCTAGAAAGCTTGCTGCGGTGTACACAGCCGTTCCGAAGCCATTGG
TTAACATTTGCTGGTCAATCCAACCTCTGACCAAGGCTACGTTGGCATAA
GCTGCTGGAACTTCATCATTACATCCGATTCCCCAAGCAACTATACCAGT
CTGTTGATATCGGGATTCACGTGTACTTCCCCTAGGACAAGCTAGTGGAG
CCCCGCCATCCCCTTGACAGGTATCAATGCCACGCTGTCCACCCGCGCAT
ATGAATGACCTATCCAATGCAAACTTTGGTCCAAGTCGAGTGCCTCTAAG
TCGTGTCTGACAACTGTTAAACTCAACAATGGGCAATGGAACACGTTTCA
TTAAGGAGCTATATTTGCCCAAAGAACCAAAAGCATCTTTTCCCCAGCCG
GTGGAAAAACATGTGTTACCGGGCTGCGGAATATCATCTTGTTGAGGTAA
ACATATAACATTAATGTGATCATCCAAAGTAACCGGCTGACTTAGAATTA
CAAGTGCGAAATCATAAGCTATGCTTCTTCTGTTATAATCTGGGTGCAAT
ATAACAGTTTGAACCGATCTTTCTTGATAGGGTAGACGCTCTTTCATTGT
TTGTGTATCCCACTCTCCAGCTCGGACAGTAAACGATCCTGTTCTAAGCG
ACTCAACACAGTGCGCAGCGGTCAAAACCACCTGTTTATGTATAAGAGAT
CCAGCACAGAAATAGCTTAAATTTCCAGAATGCAATAATGCTACCGTCCA
TGGAAACTCGCCAAAACCCGCTTCATTTTGCGATACTCCGGAAAGAGTAA
AATCCCA
MXO02175.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-10 05:18:47 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:49:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG40160-RH | 4869 | CG40160-RH | 561..1347 | 805..19 | 3935 | 100 | Minus |
| CG40160-RG | 1478 | CG40160-RG | 597..1383 | 805..19 | 3935 | 100 | Minus |
| CG40160-RF | 1422 | CG40160-RF | 541..1327 | 805..19 | 3935 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:49:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 26225125..26225911 | 805..19 | 3935 | 100 | Minus |
| 2R | 25286936 | 2R | 3468955..3469726 | 19..805 | 2925 | 92.5 | Plus |
| 2R | 25286936 | 2R | 3335571..3336083 | 545..19 | 1995 | 92.8 | Minus |
| 2R | 25286936 | 2R | 3335335..3335566 | 805..577 | 850 | 93.1 | Minus |
| 3L | 28110227 | 3L | 26223678..26223790 | 443..332 | 335 | 88.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:49:29 has no hits.
MXO02175.3prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:22 Download gff for
MXO02175.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG40160-RF | 540..1333 | 11..806 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:34:08 Download gff for
MXO02175.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG40160-RF | 540..1333 | 11..806 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:34:08 Download gff for
MXO02175.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 26225124..26225917 | 11..806 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:22 Download gff for
MXO02175.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3LHet | 1571674..1572467 | 11..806 | 99 | | Minus |
MXO02175.5prime Sequence
796 bp (739 high quality bases) assembled on 2007-01-19
> MXO02175.5prime
GCGGCCGCGACGTCCACATATACCTGCCGTTCACTATTATTTAGTGAAAT
GAGATATTATGATATTTTCTGAATTGTGATTAAAAAGGCAACTTTATGCC
CATGCAACAGAAACTATAAAAAATACAGAGAATGAAAAGAAACAGATAGA
TTTTTTAGTTCTTTAGGCCCGTAGTCTGCAAATCCTTTTATGATTTTCTA
TCAAACAAAAGAGGAAAATAGACCAGTTGCAATCCAAACGAGAGTCTAAT
AGAATGAGGTCGAAAAGTAAATCGCGCGGGTTTGTTACTGATAAAGCAGG
CAAGACCTAAAATGTGTAAAGGGCAAAGTGTATACTTTGGCGTCACCCCT
TACATATTTTAGGTCTTTTTTTATTGTGCGTAACTAACTTGCCATCTTCA
AACAGGAGGGCTGGAAGAAGCAGACCGCTAACACAGTACATAAAAAAGGA
GACATGAACGATGAACATCAAAAAGTTTGCAAAACAAGCAACAGTATTAA
CCTTTACTACCGCACTGCTGGCAGGAGGCGCAACTCAAGCGTTTGCGAAA
GAAACGAACCAAAAGCCATATAAGGAAACATACGGCATTTCCCATATTAC
ACGCCATGATATGCTGCAAATCCCTGAACAGCAAAAAAATGAAAAATATA
AAGTTCCTGAGTTCGATTCGTCCACAATTAAAAATATCTCTTCTGCAAAA
GGCCTGGACGTTTGGGACAGCTGGCCATTACAAAACACTGACGGCACTGT
CGCAAACTATCACGGCTACCACATCGTCTTTGCATTAGCCGGAGAT
MXO02175.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-10 05:18:54 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 22:28:23 has no hits.
Blast to na_all.dmel.RELEASE6 performed on 2014-11-28 22:28:20 has no hits.
Blast to na_te.dros performed on 2014-11-28 22:28:22 has no hits.
MXO02175.5prime Sim4 Records
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 23:00:06 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 23:00:06 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 01:04:11 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 01:04:11 has no hits.
