MXO02178.3prime Sequence
637 bp (626 high quality bases) assembled on 2007-01-19
> MXO02178.3prime
ATGGTCTAGAAAGCTTGCGGTATGATTATCCATGAACTGCAGTTCCGACC
ACAGGAGCAGGGCGTTCGGGGGCAAAGGTCGCGGCTGCGGCGAAAGCAAC
ATCACTGCCTGTCTTTCCATATCCACTTCGGTTACGCAACAAAAGCCGGC
CACATTGGTGCCAATCACATCGTCCTCCACGGACTCGGCAAAGCTGAGGG
CCAGCACATGATGGATTAGGGCGGGCGTGGGTGTAACCGCCACCACCTTG
GTCTTGTTGTCCTCCGCCTTCATTCCAATTGGCATGCAGGAGTCGGGCAG
CGGCGGTGCGCCGATCTTGTAGAGTCGCAGGTCCTGGAACTTCACCTCGA
AGCTGAACGGATAGAAGGGCGCCCTTGTATTGCCGTAGAAGTACTCCTTG
ATGCGCTGATCCCTCGCCTCGTGTCGCAGTTCCTTGCTGCGCTCGACGAC
GCCGCCGCTCTTGGGCAGCAGTACCACATGAACTCCCTTGGGAACATCTC
GAAGCAGCTCGTTGTATAGTCGCTCCTGGTCCAAACAAAGATGGCACAGG
CTCCATAGGCTTTGGCCGCGTGCAACAGGTGCGCGTAGCCGGATCCCTTT
ACCAGCCACAAGTGTTTATAATAATGCCAACTTTTGT
MXO02178.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:19:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5970-PA | 1272 | CG5970-RA | 657..1269 | 629..19 | 2985 | 99.6 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:26:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cbc-RA | 1654 | CG5970-RA | 764..1376 | 629..19 | 3015 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:25:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13483973..13484470 | 134..629 | 2390 | 99.6 | Plus |
| 2R | 25286936 | 2R | 13483790..13483904 | 19..133 | 575 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:26:00 has no hits.
MXO02178.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:58 Download gff for
MXO02178.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5970-PA | 646..1272 | 18..637 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:39 Download gff for
MXO02178.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cbc-RA | 753..1383 | 10..637 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:58:59 Download gff for
MXO02178.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cbc-RA | 753..1383 | 10..637 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:58:59 Download gff for
MXO02178.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13483782..13483904 | 10..133 | 96 | <- | Plus |
| 2R | 13483973..13484479 | 134..637 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:39 Download gff for
MXO02178.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9371287..9371409 | 10..133 | 96 | <- | Plus |
| arm_2R | 9371478..9371984 | 134..637 | 99 | | Plus |
MXO02178.5prime Sequence
177 bp (176 high quality bases) assembled on 2007-01-19
> MXO02178.5prime
GCGGCCGCGACGTCCACATATACCTGCCGTTCACTATTATTTAGTGAAAT
GAGATATTATGATATTTTCTGAATTGTGATTAAAAAGGCAACTTTATGCC
CATGCAACAGAAACTATAAAAAATACAGAGAATGAAAAGAAACAGATAGA
TTTTTTAGTTCTTTAGGCCCGTAGTCT
MXO02178.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-10 05:19:24 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 21:49:40 has no hits.
Blast to na_all.dmel.RELEASE6 performed on 2014-11-28 21:49:38 has no hits.
Blast to na_te.dros performed 2014-11-28 21:49:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| P-element | 2907 | P-element PPI251 2907bp AKA(V01520,X69493) Derived from X06779 (g58305) (Rel. 49, Last updated, Version 8). | 2084..2131 | 150..102 | 107 | 71.4 | Minus |
MXO02178.5prime Sim4 Records
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 22:34:15 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 22:34:15 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 00:46:27 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 00:46:27 has no hits.
