MXO02179.3prime Sequence
805 bp (635 high quality bases) assembled on 2007-01-19
> MXO02179.3prime
ATGGTCTAGAAAGCTTGCTTGCTCGGCTATGTAATCCTTAAGTGCGTTGC
AAAGTCTTCTAGCACCATCCACCAACTTCGACTTCGGATAGAAGGCGATG
GACAGGCGGAAGAACTGTTTGCCACTTTGACCATCCGCAGAGAAGCGTGT
TCCTACTATAAAGTAGATCTTGTGATTCTCCATGCAGTACTTGAGAAACT
CCCGGCAGTCCAATCGATCCGGTATCCGCACCCAAATGAAGTATCCGCCC
GTGGGGCTGACCAACTTGCAGCAGTCGGGCAACTCATCTCGAAGCACTTG
CGTGGTGGCCAGCATGCGCTCCTTATAAGCTTCATAGGACTCAGAAATTT
GCTTCTGGGCTAGCTTAAGCTCAAATAGACTGCCCACAATCCCTGATGTG
TAGTTGTTGAAGCATCCACCACTAGTGGCAAAACCACTTCCATCTAAAAT
TGGTTTCAGGCGCGGAGGAACCTCAAGCCAACCCAGGCGAACTCCCGGTC
CCAGAATCTTGGAGAAACTTCCATTGGAGATAACATGTCCTGCGAAGTTG
GCATCATTTCTGTCATCATAGGACAACAGACGGCTGTGTGTGGGCGTTTC
GCCATAGTTGAGAATATTATAAACATCATCGCAGACGACAAGGAAATCAT
AATTCCTAGCAAGTTGCACAATTCCACGACAGACCTCCGGCGAGAATAGA
ATCCCCGTGGGATTATGATACGTTGGTATCGTATAGTAGATTCCCCAGAA
CTTTTTCTTCTTCGATTGAAATCGTCGTTTTGATACCTTCTCTTCAAGAT
CCTTC
MXO02179.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:19:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6321-PA | 1257 | CG6321-RA | 468..1254 | 805..19 | 3910 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:28:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6321-RA | 1594 | CG6321-RA | 563..1349 | 805..19 | 3920 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:28:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11059682..11060350 | 19..687 | 3345 | 100 | Plus |
3L | 28110227 | 3L | 11060420..11060538 | 687..805 | 580 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:28:29 has no hits.
MXO02179.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:58 Download gff for
MXO02179.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6321-PA | 468..1257 | 18..805 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:14 Download gff for
MXO02179.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6321-RA | 563..1355 | 11..805 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:08 Download gff for
MXO02179.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6321-RA | 563..1355 | 11..805 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:08 Download gff for
MXO02179.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11059676..11060349 | 11..686 | 99 | <- | Plus |
3L | 11060420..11060538 | 687..805 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:14 Download gff for
MXO02179.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11052776..11053449 | 11..686 | 99 | <- | Plus |
arm_3L | 11053520..11053638 | 687..805 | 99 | | Plus |
MXO02179.5prime Sequence
857 bp (757 high quality bases) assembled on 2007-01-19
> MXO02179.5prime
CAGTCGACATGTTGAAATCCAGTCAAGATCGCAAGCTAAAGCACCTTTTC
GATGGCGGTGATTGGAATGTATACGCTCCGAACATCCTAAATCTCGGAGT
GGGTGCTCCAGGACCAGATATCCTGACCGCCAACTGTGATAGCTTCCGGA
CGGCCACAGATCATTGTCTGGAACGCGAAAAGCGGGAAAACCAGTCGCTA
ATTTTCCAATATGGACCAACAAGTGGAACATTCGAGGTGCGACGCGAGAT
CTCCACCTATTTCACCGAAATGTTCAAAAGTCCCGTCAATTGTGAGGATT
TGATAATAACCACAGGAGCATCCCATGGCCTTCACATACTTTTGTCCACA
ATGTTGGACTTTGAGGGTTTCGTATTCGTCGATGAGTACACCTATATGAT
TGCTTTAGATAGTATAAAACACTTTAGCACTGTGACCATAGTTCCCGTAA
AGCTCAACGATGATGGCGTGGATCTGAAGGATCTTGAAGAGAAGGTATCA
AAACGACGATTTCAATCGAAGAAGAAAGAGTTCTGGGGAATCTACTATAC
GATACCAACGTATCATAATCCCACGGGGATTCTATTCTCGCCGGAGGTCT
GTCGTGGAATTGTGCAACTTGCTAGGAATTATGATTTCCTTGTCGTCTGC
GATGATGTTTATAATATTCTCAACTATGGCGAAACGCCCACACACAGCCG
TCTGTTGTCCTATGATGACAGAAATGATGCCAACTTCGCAGGACATGTTA
TCTCCAATGGAAGTTTCTCCAAGATTCTGGGACCGGGAGTTCGCCTGGGT
TGGCTTGAGGTTCCTCCGCGCCTGAAACCAATTTTAGATGGAAGTGGTTT
TGCCACT
MXO02179.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:19:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6321-PA | 1257 | CG6321-RA | 1..849 | 9..857 | 4245 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6321-RA | 1594 | CG6321-RA | 94..944 | 7..857 | 4255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11060420..11060722 | 594..292 | 1515 | 100 | Minus |
3L | 28110227 | 3L | 11060087..11060350 | 857..594 | 1320 | 100 | Minus |
3L | 28110227 | 3L | 11060967..11061131 | 171..7 | 825 | 100 | Minus |
3L | 28110227 | 3L | 11060786..11060908 | 292..170 | 615 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:23:07 has no hits.
MXO02179.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:59 Download gff for
MXO02179.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6321-PA | 1..849 | 9..857 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:11 Download gff for
MXO02179.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6321-RA | 88..944 | 1..857 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:32 Download gff for
MXO02179.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6321-RA | 88..944 | 1..857 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:32 Download gff for
MXO02179.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11060087..11060349 | 595..857 | 100 | <- | Minus |
3L | 11060420..11060721 | 293..594 | 100 | <- | Minus |
3L | 11060786..11060907 | 171..292 | 100 | <- | Minus |
3L | 11060968..11061137 | 1..170 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:11 Download gff for
MXO02179.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11053886..11054007 | 171..292 | 100 | <- | Minus |
arm_3L | 11054068..11054237 | 1..170 | 97 | | Minus |
arm_3L | 11053520..11053821 | 293..594 | 100 | <- | Minus |
arm_3L | 11053187..11053449 | 595..857 | 100 | <- | Minus |