MXO02189.3prime Sequence
823 bp (650 high quality bases) assembled on 2007-01-19
> MXO02189.3prime
ATGGTCTAGAAAGCTTGCGATCATGTGCAGCTTCTGATCGTTGAGTTTGA
ATGCCGCCGCATCGCTATGGAGGTGAAAAGGCACAATATCACCTGTTGTG
GCCATATCAAATGATGGTGACATAGACGTTGCCGTTGCAGTTGCCGGACT
ATTGCTGCCACTGGTATTTGCGATGCCCGCCTTGAGATGTAGGCTGTCCA
TGGACATTTGCTGAGACTGCGTGTGAGGAAGGGGATTGGTGTGGATATGC
GGATGGGCTGGGGGATGAGTTATGCTCGCTGGGACGGTTGAGAGTTTTCC
TGAGTTTGTTGTGATTATTATGTTTCCGGCATGGGAAGCACCACGTCCAC
GTTTCCGCTTCGGAAGAATTCCTTTTCGCGCCATATAGAAACGAATGGTT
GAGACAGGAATATTGAACATATTGCTGACAGTTTGGAATGTCTCGCCCTT
CGAAACACATTTGGCCGCTTGTGCTAGAGATGCTTCTGAACGTCGAACGC
GCTTATATGAAGTATAACCATCGATCGAGCTATGGCTCAGTCCTCCGGAA
GTATTGGCCGATGTATCGAGATCAGTGTCAAGGCTGAGGGATAGCCCGGA
TCCGCATGGCACTCCTGTCGCAAAACTGCTGTCATTGTTTTCATCATGAG
CGGCCACATAGTTGTGGTCGTCCTCAACATTTGAATCCAAGTATTGCTGC
TGCTGAAGCTGCATTTGCATCCTCGCCTGCTGCAGGGATAGGTGGACATT
CATTTTGTTGTCAACGGCTTGCGCAGATATATTGCAATCATCGAATTGCT
CCCCGTANGCATTCAAATTGTTC
MXO02189.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:22:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8924-PB | 1545 | CG8924-RB | 738..1542 | 823..19 | 3981 | 99.7 | Minus |
CG8924-PA | 1545 | CG8924-RA | 738..1542 | 823..19 | 3981 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8924-RB | 2575 | CG8924-RB | 1374..2178 | 823..19 | 3999 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15943348..15944052 | 723..19 | 3525 | 100 | Minus |
X | 23542271 | X | 15943189..15943291 | 823..721 | 489 | 98.1 | Minus |
Blast to na_te.dros performed 2014-11-28 19:23:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
baggins | 5453 | baggins BAGGINS 5453bp | 1368..1426 | 607..550 | 112 | 67.8 | Minus |
MXO02189.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:07 Download gff for
MXO02189.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8924-PA | 738..1545 | 15..823 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:13 Download gff for
MXO02189.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8924-RB | 1374..2181 | 15..823 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:36 Download gff for
MXO02189.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8924-RB | 1374..2181 | 15..823 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:36 Download gff for
MXO02189.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15943189..15943290 | 722..823 | 98 | -> | Minus |
X | 15943350..15944055 | 15..721 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:13 Download gff for
MXO02189.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15837222..15837323 | 722..823 | 98 | -> | Minus |
arm_X | 15837383..15838088 | 15..721 | 99 | | Minus |
MXO02189.5prime Sequence
843 bp (762 high quality bases) assembled on 2007-01-19
> MXO02189.5prime
CAGTCGACATGAGCGGCGCTACACAGGAATTTTGTGTACGCTGGAACAGC
CATTTGGGCAGCATTGGAGCTGCTTTTCCGCAGCTGCTAGCAGGCCAGAG
ATTCGTGGATGTAACACTCGCATGCGAAGGCCAACAGGTGCACTGCCATC
GTCTGGTGTTGGCCGCTTGTTCCACCTACTTTGAGGCAATACTAGCGGAG
CATCCTTGCAAGCACCCGGTCATCATATTGCCCAGGGAGATCAAGCTATG
GGAGATCCAGGCGCTTGTGGACTTCATGTACAAGGGAGAGGTCAATGTCA
CGCAAGCCGGTCTTGGCCAGTTGCTTCGCTGTGCCGAACAACTGCAGATT
CGCGGTCTATACGGCTCTGAGGCACCGATAAACTACAAGAAACTCCAGCA
GGCGAGTCTCGAGGCTGCTAAGGATCCAGCTGCAACCACAGCGCGAAGCT
TCAAGCATGTGGACAGCGCGGAAACGGACGATGCAGCCACTAATTCAACC
ACCTCAACAACAATGACCACCTCCTCCGCTCCACCGCTACCGGTTAACCA
TCAGCAACCCACAGTATTGAAGCGCCAGAATCCCGATGCTCGGCAGCAGC
AGCAACAGCAGCAGCAGCAGCAGGTGCAGCAGCGACCCCAGATAAATGGC
AGTAATGCTCAACAGCCATCTAAGGCCACCTCTACGAACGTTTTGGGCAG
CCACTCGAATGCACCAACCGAGGATGACTCCGGCGACGAGGTGCCGAACA
ATTGGAATGCCTACGGGGAGCAATTCGATGATTGCAATATATCTGCGCAA
GCCGTTGACAACAAAATGAATGTCCACCTATCCCTGCAGCAAG
MXO02189.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:22:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8924-PB | 1545 | CG8924-RB | 1..833 | 9..841 | 4165 | 100 | Plus |
CG8924-PA | 1545 | CG8924-RA | 1..833 | 9..841 | 4165 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8924-RB | 2575 | CG8924-RB | 637..1469 | 9..841 | 4165 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15942452..15943284 | 9..841 | 4165 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:29:19 has no hits.
MXO02189.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:07 Download gff for
MXO02189.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8924-PA | 1..834 | 9..843 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:35:20 Download gff for
MXO02189.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8924-RB | 630..1470 | 1..843 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:02 Download gff for
MXO02189.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8924-RB | 630..1470 | 1..843 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:02 Download gff for
MXO02189.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15942445..15943285 | 1..843 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:35:20 Download gff for
MXO02189.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15836478..15837318 | 1..843 | 99 | | Plus |