MXO02190.3prime Sequence
873 bp (710 high quality bases) assembled on 2007-01-19
> MXO02190.3prime
ATGGTCTAGAAAGCTTGCAAGCATTTGAACAAATACAAGGCTGAGCAGTG
ATCCCACAGCCATGCCACAGCTCAAAGCAGCTGCCATTATCGACGAAGCC
AGCTCCTTTTCATGCTGCTTTACGCGTTTAGGCGCCATTATAAGTAGTAT
GTTCGTAAAATATCCGTTGGACAAGGCAAACATTACCATCATCGCTATGA
AAGTATAGTCGTGTTTTACCAAAACTGGCAGAAAGCTGTGTTCGCTGGAG
TTTGAACATAGAAATAACGGAACAAACGCCATGCGCACTACAATAAATAG
TAGCGAAGTGTTCTGGTTTAATGGTCGCTCCATCCAGCCAGCAAACAGAC
GACCAAAATAGTCACCGCAGTTAAATATCAGGTAGTTCACGACGGGCAGA
AAATAAACATCTGTCCACACGCTGTGGCCGTACTCTGACTGCATAAGCAC
TGTAACTGCCGGATAGACAGACAGGGTCGTGGTATAGAGGAGCGCTAGGG
AAATGGCATGCAGATAGATCTTCGACATGACCTGACGCAAAATAGGCTCA
AGCGGCAAGCCCTCAGCGCTTCCATTCCGGTTGTGCGAGGGCACTGCCCG
GATGACCTTGTACTTGTCGCCACCTTCGAGATAATACCTAAAGAAAGGCT
TTCGAGCCAGGATTACGTAGCACACAATGCAAAGCAGGATGAGCACTCCT
CCCACAATGAAGAAGATGAATGCAGTGGTATTGGGACCCGTGTCGAATGC
AAGCACAAGAATGAAGGCCAGGGCTGTGAGGATACCACCAAGAGCCTGTC
CGCTAACCACAGCGGTGATAAACTCGGAGGGAATAGACCAGCGACTCCGT
AGAGGGCTCCCGACATTGTAGCC
MXO02190.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:22:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11907-PA | 1431 | Ent1-RA | 573..1428 | 873..19 | 4240 | 99.8 | Minus |
CG11907-PB | 1431 | Ent1-RB | 573..1428 | 873..19 | 4240 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:28:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ent1-RC | 1905 | CG11907-RC | 694..1549 | 873..19 | 4255 | 99.9 | Minus |
Ent1-RB | 1923 | CG11907-RB | 712..1567 | 873..19 | 4255 | 99.9 | Minus |
Ent1-RA | 1972 | CG11907-RA | 761..1616 | 873..19 | 4255 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:28:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 356367..356830 | 411..873 | 2270 | 99.8 | Plus |
2L | 23513712 | 2L | 355921..356316 | 19..414 | 1980 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:28:36 has no hits.
MXO02190.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:08 Download gff for
MXO02190.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11907-PB | 573..1431 | 16..873 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:18 Download gff for
MXO02190.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ent1-RA | 761..1622 | 11..873 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:11 Download gff for
MXO02190.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ent1-RA | 761..1622 | 11..873 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:11 Download gff for
MXO02190.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 355915..356312 | 11..410 | 99 | <- | Plus |
2L | 356367..356830 | 411..873 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:18 Download gff for
MXO02190.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 355915..356312 | 11..410 | 99 | <- | Plus |
arm_2L | 356367..356830 | 411..873 | 99 | | Plus |
MXO02190.5prime Sequence
827 bp (825 high quality bases) assembled on 2007-01-19
> MXO02190.5prime
CAGTCGACATGCCAGGCACCAGTGACACACGACGACTGGTGGACGCCCTG
GACGAGGATGACGAGATTCTGGGCACGGAGGGCAGCTTCGTTCCCGCTTT
TCGTCCGCAGGACCACCATGCGGATGAGCAATGTCTCATGGAACGCCAGC
AGGACGAGGTAGTTTTGGTGTCCAACGAACCCGAGAGTGGACGACTCTTC
ACCTACCTCGTGTTCTACCTGTTGGGCATTGGTACCATGACCCCGTGGAA
TTTCTTTGTGACTGCGGAAGATTACTGGAAGTACAAGTTCCGGAATGCAT
CGATTAATAACACAGACCTGGAGGAAGAGCTCACCCCGTTGCAGAAGAGT
TTTACCTGCGACTTGGCTCTCACGGCCACTATTTCTGGGACTACATTTCT
GCTGCTAAACGCCATTTTCGGACACCATGTGTCCCTGCGCACCAAGATGT
TAGGAACGCTGTGGATGATCCTCATCCTTTTCGGGGTTACAACTGGCTTC
GTGGAGATCAACACAGACACGTGGCAGGAACAGTTTTTCCTAATCACTCT
CATCATTGTAGTGCTGCTAAATATATCTGCGGCTACAATGTCGGGAGCCC
TCTACGGAGTCGCTGGTCTATTTCCCTCCGAGTTTATCACCGCTGTGGTT
AGCGGACAGGCTCTTGGTGGTATCCTCACAGCCCTGGCCTTCATTCTTGT
GCTTGCATTCGACACGGGTCCCAATACCACTGCATTCATCTTCTTCATTG
TGGGAGGAGTGCTCATCCTGCTTTGCATTGTGTGCTACGTAATCCTGGCT
CGAAAGCCTTTCTTTAGGTATTATCTC
MXO02190.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:22:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11907-PA | 1431 | Ent1-RA | 1..819 | 9..827 | 4095 | 100 | Plus |
CG11907-PB | 1431 | Ent1-RB | 1..819 | 9..827 | 4095 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ent1-RC | 1905 | CG11907-RC | 122..940 | 9..827 | 4095 | 100 | Plus |
Ent1-RB | 1923 | CG11907-RB | 140..958 | 9..827 | 4095 | 100 | Plus |
Ent1-RA | 1972 | CG11907-RA | 189..1007 | 9..827 | 4095 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 356891..357191 | 573..273 | 1505 | 100 | Minus |
2L | 23513712 | 2L | 357423..357686 | 272..9 | 1320 | 100 | Minus |
2L | 23513712 | 2L | 356584..356837 | 827..574 | 1270 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:29:29 has no hits.
MXO02190.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:08 Download gff for
MXO02190.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11907-PB | 1..819 | 9..827 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:35:25 Download gff for
MXO02190.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ent1-RA | 181..1007 | 1..827 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:10 Download gff for
MXO02190.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ent1-RA | 181..1007 | 1..827 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:10 Download gff for
MXO02190.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 357423..357694 | 1..272 | 98 | | Minus |
2L | 356584..356837 | 574..827 | 100 | <- | Minus |
2L | 356891..357191 | 273..573 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:35:25 Download gff for
MXO02190.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 356584..356837 | 574..827 | 100 | <- | Minus |
arm_2L | 356891..357191 | 273..573 | 100 | <- | Minus |
arm_2L | 357423..357694 | 1..272 | 98 | | Minus |