Clone Sequence Records
MXO02192.3prime Sequence
832 bp (699 high quality bases) assembled on 2007-01-19
> MXO02192.3prime
ATGGTCTAGAAAGCTTGCGAGAGCCACTGCATCGGTGGCCACTGGATGAT
TCTGGACAGCATTTCCCTCCTCGCCGGCATCGTCGTTGACCACAATAACC
TCGTTGGACGGTACGCCAGCATCCTCGAAGGAATCATCAATATTTTCGCC
ACTCGCACGCAGCTCATTATCGGATTCCGGAACGAATTCACCCACCTCAT
CATTGGCAGGATCGATTTTGTCATCTACGGCTGGCTTCTCTGTGGCCTGA
GTGGCTGGTGCGGCAGCTGGTGCGTTCTGTGGACGATTGCCGCCCAGGAA
GTTGATAATTCCCTGCAGAGGATTGCCACTTTGCTGGGCAGGCGGTGCGG
CAGCCGTGGCATTGTTATTGCCACCGAAAACATTGTTGACAAACTGCTGG
ATGGGACCTGGTGGACGCGGAGTGGTGGACACCGCCTGCTGCTGCTGGCC
AGTCAAGCTGGACAGGGTGTTCTGGAACTGATTGCCCAGGTTGCTGGCAA
ACTGTTGGATGCCCTGGAAGGCCTGGGTGGTGGCATTGACGGCACTTTGG
GCCGCATTTTGCACGGCCTGTTGGGCGGAGGTGATGGCGGCCTGGGGATT
CAGGAAACCGGGCACCGTGGGAGCCGGAGTTGCAGGTGCCGCAGCGGCGG
CATCATCCGCCTGGACTTGTGCTGCTGCTGGAGCGGCAGCAGCAGCTGGC
TGGGGCTGGAACTGATTGAGGAACTGACCAATTGGCGAGTTCTGGATCAA
CTGCTGGACAAAGTTGCCCTGGGTGGTGCTCTGCTGGGTGGGCGTGGCTT
GGGTGGCTTGACGGACCTGAGGATGCGCGGCG
MXO02192.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:22:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1934-PA | 1401 | ImpE2-RA | 585..1398 | 832..19 | 4070 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:26:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ImpE2-RA | 1708 | CG1934-RA | 664..1477 | 832..19 | 4070 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:26:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 3511205..3512018 | 19..832 | 4070 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 22:26:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 628..712 | 712..628 | 137 | 62.4 | Minus |
MXO02192.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:09 Download gff for
MXO02192.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1934-PA | 585..1401 | 15..832 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:50 Download gff for
MXO02192.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ImpE2-RA | 664..1480 | 15..832 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:59:09 Download gff for
MXO02192.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ImpE2-RA | 664..1480 | 15..832 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:09 Download gff for
MXO02192.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 3511202..3512018 | 15..832 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:50 Download gff for
MXO02192.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 3511202..3512018 | 15..832 | 99 | | Plus |
MXO02192.5prime Sequence
847 bp (774 high quality bases) assembled on 2007-01-19
> MXO02192.5prime
CAGTCGACATGAAGCCCGTTGCCTTGATCCTGGTTTTCCTGGCCATTAGC
CAAGCCAGAGTACTCAACTTGCCCAAGGAGGCGATCGATATTCCTGTGGC
CATTGTCGAGGATAAGGAGCCACCAGTAGCTTTGTCTTTGGTCAAAGAGG
AAGTTAAGGCAGAGGAAGTTAAGCCAGAGGAAGTGAAACCAATTGCTCAA
GAAGAGAAAGCCAAGGATCTCAAGGAGGAAGTTAAGCCAGAAATTAAGCC
TGAAATCAAAGAGCAGCCTAAGCCTGATATAAAAGACGAGATTAAGGAAG
ATTTAAAGGCAGACATTAAGGAGGAGCTCAAGGAGAAGATTGAAGAGCAG
ATCAACGAGTTGCCTAATGCTAAGCCCCTGGAGCTGAAGGAAAAATCCCT
GGAAGCTGAGGAGAAACCTCAGGAAATCAAAGAAGAAGTTCAGCAGCCAG
AAATCAAAAAAGAGGCCACTGAAATCAAAGAGGAACCTGCTCAGAACATT
CTGAAATCTCTGCCAGCTGAAGAGACTGTCGTTGTGCCTGCCGAGGAACT
TTCCCCGAATCCGGTGGAGCAAGAGCAGTCGGAAAACCAGGACGCCGCGC
ATCCTCAGGTCCGTCAAGCCACCCAAGCCACGCCCACCCAGCAGAGCACC
ACCCAGGGCAACTTTGTCCAGCAGTTGATCCAGAACTCGCCAATTGGTCA
GTTCCTCAATCAGTTCCAGCCCCAGCCAGCTGCTGCTGCCGCTCCAGCAG
CAGCACAAGTCCAGGCGGATGATGCCGCCGCTGCGGCACCTGCAACTCCG
GCTCCCACGGTGCCCGGTTTTCCTGAATCCCCAGGCCGCCATCACCT
MXO02192.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:23:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1934-PA | 1401 | ImpE2-RA | 1..838 | 9..847 | 4155 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ImpE2-RA | 1708 | CG1934-RA | 80..917 | 9..847 | 4170 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 3511765..3512602 | 847..9 | 4145 | 99.9 | Minus |
Blast to na_te.dros performed 2014-11-28 20:15:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 628..712 | 713..797 | 137 | 62.4 | Plus |
MXO02192.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:09 Download gff for
MXO02192.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1934-PA | 1..838 | 9..847 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:57 Download gff for
MXO02192.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ImpE2-RA | 73..917 | 1..847 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:34 Download gff for
MXO02192.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ImpE2-RA | 73..917 | 1..847 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:34 Download gff for
MXO02192.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 3511765..3512609 | 1..847 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:57 Download gff for
MXO02192.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 3511765..3512609 | 1..847 | 99 | | Minus |