MXO02194.3prime Sequence
848 bp (668 high quality bases) assembled on 2007-01-19
> MXO02194.3prime
ATGGTCTAGAAAGCTTGCAGTGGACCACAGATAGAAGTAAGTGCTTTGCC
ACGTGGGAATGTAATCTTTAAGGGGTGTGGCAACCACCTTAGCAATGGGC
ACACTTGTGGCCACAAAGTCGAGGATCCGCTCCAGTCTGGATTTGGTGAA
GCTGTCATAGAACGGCGATCGGACCAGGAAGTACATGATGTTTATGCATC
GCCTGCTCACTCCAGTTTTTGTTGCTTGGACATTAGGTCGCGATGCTGGC
GGTAGAGGTGAATGCTATACAAATCAATGGATAATGCTACCATATATTGC
TTCCAACTTCTCCGGCCGAACAGCCCCATGGCGACCAGGTGGATTAGTGG
CTTCGATATATACAGGTATTCTGCTTGCAGGAGTTTCCTCGGAATTTGCG
TCTTCGCCGCTTCATTGTTGTCTATATGAAGCTTGAAGTCGCGGTATTGC
AGGGGAGGAGCACCCTCCACTTTACGAATCACACGGCCAGATCGCTTCAA
TTGGAAGGTAATGGAGTGCTGGGACTGCAATAAATCGTTCGTGGAGGAGG
CCACACCATCCCCCGAATTCTTCCTCTGTTTGGCCCTTCGATTCAGTGCG
GCGATGGGCGGTGAGGTGATTATATCCGAGGTTGAGTGTTTCAAGACAAA
GAAACGGCCCGCTGCCTTGAAGGCCTGTATTAGCGCTATCACCAGCCACT
TGCCGGATTGACCGAATAGCCCACGGGCTGATATCTCGATGAAAACCTCG
CTATATTCGAGCGTCGTCAACGTGACCTTTAGACGGTAGCAAAGTTTCGA
TTGCAGGTGGATCACCGAATTCTCCTCGGAATTGCGTGCCTTTTCGAT
MXO02194.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:23:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3947-PA | 1026 | CG3947-RA | 193..1023 | 848..19 | 4015 | 99.3 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:52:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pex16-RA | 1439 | CG3947-RA | 303..1133 | 848..19 | 4070 | 99.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:52:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 20777072..20777902 | 19..848 | 4045 | 99.4 | Plus |
Blast to na_te.dros performed 2014-11-28 19:52:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 4484..4536 | 107..54 | 114 | 72.7 | Minus |
MXO02194.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:11 Download gff for
MXO02194.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3947-PA | 193..1026 | 18..848 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:04 Download gff for
MXO02194.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pex16-RA | 303..1143 | 9..848 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:30 Download gff for
MXO02194.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pex16-RA | 303..1143 | 9..848 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:30 Download gff for
MXO02194.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20777062..20777902 | 9..848 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:04 Download gff for
MXO02194.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 20770162..20771002 | 9..848 | 98 | | Plus |
MXO02194.5prime Sequence
802 bp (800 high quality bases) assembled on 2007-01-19
> MXO02194.5prime
CAGTCGACATGGACACTCTGAAGGGCATGCTGAAGGCGTACGAGGCGTGG
GTGGGCAAAAACCCCGACGTGGTGGGGGATTTTGAGACCACAGCCAAGTG
GGTATCCTACTTTATAGCAGGTCGCATTTCCTCATCAAATGTGGTCAGTG
AGCTGGTATATACACTGTCAAACATGCTGGTGTTCTACAACGACCGGATC
ATCGAAAAGGCACGCAATTCCGAGGAGAATTCGGTGATCCACCTGCAATC
GAAACTTTGCTACCGTCTAAAGGTCACGTTGACGACGCTCGAATATAGCG
AGGTTTTCATCGAGATATCAGCCCGTCGGCTTTTCGGTCAATCCGGCAAG
TGGCTGGTGATAGCGCTAATACAGGCCTTCAAGGCAGCGGGCCGTTTCTT
TATCTTGAAACACTCAACCTCGGATATAATCACCTCACCGCCCATCGCCG
CACTGAATCGAAGGGCCAAACAGAGGAAGAATTCGGGGGATGGTGTGGCC
TCCTCCACGAACGATTTATTGCAGTCCCAGCACTCCATTACCTTCCAATT
GAAGCGATCTGGCCGTGTGATTCGTAAAGTGGAGGGTGCTCCTCCCCTGC
AATACCGCGACTTCAAGCTTCATATAGACAACAATGAAGCGGCGAAGACG
CAAATTCCGAGGAAACTCCTGCAAGCAGAATACCTGTATATATCGAAGCC
ACTAATCCACCTGGTCGCCATGGGGCTGTTCGGCCGGAGAAGTTGGAAGC
AATATATGGTAGCATTATCCATTGATTTGTATAGCATTCACCTCTACCGC
CA
MXO02194.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:23:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3947-PA | 1026 | CG3947-RA | 1..794 | 9..802 | 3970 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pex16-RA | 1439 | CG3947-RA | 111..904 | 9..802 | 3970 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 20777301..20777985 | 802..118 | 3425 | 100 | Minus |
3L | 28110227 | 3L | 20778041..20778154 | 122..9 | 570 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:29:40 has no hits.
MXO02194.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:11 Download gff for
MXO02194.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3947-PA | 1..793 | 9..801 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:35:28 Download gff for
MXO02194.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pex16-RA | 111..903 | 9..801 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:18 Download gff for
MXO02194.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pex16-RA | 111..903 | 9..801 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:18 Download gff for
MXO02194.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20777302..20777982 | 121..801 | 100 | <- | Minus |
3L | 20778043..20778154 | 9..120 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:35:28 Download gff for
MXO02194.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 20770402..20771082 | 121..801 | 100 | <- | Minus |
arm_3L | 20771143..20771254 | 9..120 | 100 | | Minus |