MXO02202.3prime Sequence
862 bp (801 high quality bases) assembled on 2007-01-19
> MXO02202.3prime
ATGGTCTAGAAAGCTTGCCCAACTGGAGAAATCTCCAAAACCATTCGCCA
GTTTCTTCTTCTTGGCTGCTTGAGCGGATGTAAGTGGCGCCTCTGGCTTT
TTGGCCACTGTCTGAAGTTTCAGGTACTTGCCTACGCCCTCTCTGTACAC
CTTCAGTGGCTCCTTCATGCGCTTTTGCTGCTCCTCCTTCTTGACAATCT
CCTCCTTGCCGGCCGCCTCCTCCTCGCGCTCCTTGGCCAACTGTTCGGCT
GCCTCGGCAAATGGATTCACAAAGACCTGTGAGGACTCAATGATGATGTC
CTCAATTGGTCTGTCCTTGTTATCCACCTCGATATTTTCCATCTTTTGAA
GAGTGTCTAATCCTCCGACAAGCTTTCCAAAGATGGTGTGTTTGCCGTCG
AGATGTTTGCAAGAGCGATAGGTGATAAAGAACTGAGAGCCATTGGTGTT
GGGTCCCGAATTGGCCATTGATAGCACTCCTCGGCCCGTGTGCGTAAGAT
TCGGCTTAAACTCGTCCTCAAACTTCTTGCCCCAAATGGACTCGCCACCA
GAACCACTTCCAGTGGGATCACCACCTTGCACAATAAAATTCCTTATGGA
CCGGTGAAACATAACATTATTGTAGTAACCATTGGCGCAATGCTTGATGA
AGTTATCGCAGGCTCGAGGAGTTTGATCGCAGAAGAGCTCCAGGTTGAGA
GGGCCAAGGTTCGTATTTAAACGAACGTAGCCCTTCTTTTTTACCCGCTC
GTACTTGACCAAATCATCATCTATGATAGCCGCCTCTATTTGGGAAACGG
GCACCATGGCGGTAGACGTAAAACTGGCCGCCACCGCTCCAGTTGAATAG
TGAGCTGCGTTG
MXO02202.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:24:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7747-PA | 1554 | CG7747-RA | 708..1551 | 862..19 | 4220 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:44:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7747-RA | 1696 | CG7747-RA | 804..1647 | 862..19 | 4220 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:44:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16292313..16292724 | 19..430 | 2060 | 100 | Plus |
2R | 25286936 | 2R | 16292987..16293268 | 581..862 | 1410 | 100 | Plus |
2R | 25286936 | 2R | 16292783..16292934 | 431..582 | 760 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:44:42 has no hits.
MXO02202.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:13 Download gff for
MXO02202.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7747-PA | 708..1554 | 15..862 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:43 Download gff for
MXO02202.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7747-RA | 804..1650 | 15..862 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:39 Download gff for
MXO02202.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7747-RA | 804..1650 | 15..862 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:39 Download gff for
MXO02202.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16292310..16292724 | 15..430 | 99 | <- | Plus |
2R | 16292783..16292934 | 431..582 | 100 | <- | Plus |
2R | 16292989..16293268 | 583..862 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:43 Download gff for
MXO02202.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12179815..12180229 | 15..430 | 99 | <- | Plus |
arm_2R | 12180288..12180439 | 431..582 | 100 | <- | Plus |
arm_2R | 12180494..12180773 | 583..862 | 100 | | Plus |
MXO02202.5prime Sequence
821 bp (787 high quality bases) assembled on 2007-01-19
> MXO02202.5prime
CAGTCGACATGGGTAAAAGGCAGCATCAAAAGGACAAAATGTACCTCACG
TACACGGAGTGGAGTGAGCTGTATGGCGGCAAAAAAGTGGAATCCTTGGA
GAACGACCATGTCAAGTTCAAGCGGCTGCCATTCGAGCACTGCTGCATTA
CGATGGCGCCCTACGAGATGCCCTACTGCGATCTACAGGGCAATGTGTTC
GAGTACGAGGCCATTCTTAAGTTTCTCAAGACCTTTAAGGTGAACCCCAT
CACCGGGCAGAAGATGGACTCCAAGTCATTGGTGAAGCTGAACTTCCACA
GGAATGCAAACGATGAGTACCACTGCCCCGCCTTGTTCAAGCCCTTCAGC
AAGAACTCGCACATCGTGGCGGTGGCCACAACTGGAAATGTATACTGCTG
GGAGGCAATCGACCAGCTGAACATTAAGACAAAGAACTGGAAGGATCTGG
TGGATGACACGCCATTCCAGCGTAAGGATATCATCACAATACAAGATCCT
CAGAAGCTGGAAAAGTACGACATCTCGACCTTCTATCATATTAAGAAGAA
TCTACGAGTCCTGACGGAAGAAGAGCAGCAAGAGAGAAAGAATCCAGCCA
GCGGCCGCATTAAGACCATGAATCTGGAGACCAAGGAGACGCTGGAACAG
CTGCAGCAGGACTATCAGCCAGCGGAAGAGGAGGCCTCCACTTCGAAGCG
TACAGCTGACAAGTTCAACGCAGCTCACTATTCAACTGGAGCGGTGGCGG
CCAGTTTTACGTCTACCGCCATGGTGCCCGTTCCCAATAGAGCGCTATCA
TAATGAGATTGTCAGTACACG
MXO02202.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:24:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7747-PA | 1554 | CG7747-RA | 1..774 | 9..782 | 3870 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:28:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7747-RA | 1696 | CG7747-RA | 97..894 | 9..802 | 3890 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:28:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16293202..16293943 | 782..41 | 3710 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:28:49 has no hits.
MXO02202.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:14 Download gff for
MXO02202.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7747-PA | 1..803 | 9..806 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:28 Download gff for
MXO02202.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7747-RA | 89..899 | 1..806 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:19 Download gff for
MXO02202.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7747-RA | 89..899 | 1..806 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:19 Download gff for
MXO02202.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16293173..16293943 | 41..806 | 99 | <- | Minus |
2R | 16294003..16294042 | 1..40 | 92 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:28 Download gff for
MXO02202.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12180678..12181448 | 41..806 | 99 | <- | Minus |
arm_2R | 12181508..12181547 | 1..40 | 92 | | Minus |