Clone Sequence Records
MXO02206.5prime Sequence
498 bp (498 high quality bases) assembled on 2007-01-19
> MXO02206.5prime
CAGTCGACATGGTCTTGAAAGTCTACGTCAGCGGCATGTCCGGCAATAAG
GAGGTGAAGAAGCGCCAGCAGCGCGTTCTGATGATCCTGGACAGCAAGAA
CATCAAGTACGACACGGTGGACATCACGGAGCCCGGCAAGGAATCCGAGA
AGGAGCTGATGCAAAACAAATCGACAAGCAACGGTGGAACGGTCAGCGAT
CCAGAGCCCCGTCATCCGCTTCCTCCGCAGCTGTTCAACGACGACGAGTA
CTGCGGTGATTACGACGCCTTTGACATGGCCAACGAGATCGATACCCTGG
AGGTGTTCCTCAAGCTGGCTCCAGCCGACACCACGGCAGTTAGTACCGCC
CAAATCGAACTGAAGCAGGAGAACGGCGATGCCAAGAAGGAGGAGGCGGA
AACGGAGGCGGAGGATAAGAAAACGGAGGCCGGCGATGGCGATGTGGATG
TCAAGGAGGAGGCTGCTGAGAAGGCCGAGGTTGCAAGCTTTCTAGACC
MXO02206.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:25:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8582-PA | 477 | Sh3beta-RA | 1..474 | 9..482 | 2370 | 100 | Plus |
| CG8582-PB | 477 | Sh3beta-RB | 1..474 | 9..482 | 2370 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:04:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sh3beta-RB | 1515 | CG8582-RB | 327..800 | 9..482 | 2370 | 100 | Plus |
| Sh3beta-RA | 1419 | CG8582-RA | 231..704 | 9..482 | 2370 | 100 | Plus |
| Sh3beta-RE | 2338 | CG8582-RE | 327..797 | 9..479 | 2355 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:04:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7367556..7367986 | 482..52 | 2155 | 100 | Minus |
| 3L | 28110227 | 3L | 7368886..7368934 | 57..9 | 245 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:04:42 has no hits.
MXO02206.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:17 Download gff for
MXO02206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8582-PB | 1..477 | 9..485 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:23:32 Download gff for
MXO02206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sh3beta-RA | 223..711 | 1..490 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:50:40 Download gff for
MXO02206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sh3beta-RA | 223..711 | 1..490 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:50:40 Download gff for
MXO02206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7367549..7367984 | 54..490 | 99 | <- | Minus |
| 3L | 7368890..7368942 | 1..53 | 92 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:23:32 Download gff for
MXO02206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7360649..7361084 | 54..490 | 99 | <- | Minus |
| arm_3L | 7361990..7362042 | 1..53 | 92 | | Minus |
MXO02206.3prime Sequence
498 bp (498 high quality bases) assembled on 2007-01-19
> MXO02206.3prime
ATGGTCTAGAAAGCTTGCAACCTCGGCCTTCTCAGCAGCCTCCTCCTTGA
CATCCACATCGCCATCGCCGGCCTCCGTTTTCTTATCCTCCGCCTCCGTT
TCCGCCTCCTCCTTCTTGGCATCGCCGTTCTCCTGCTTCAGTTCGATTTG
GGCGGTACTAACTGCCGTGGTGTCGGCTGGAGCCAGCTTGAGGAACACCT
CCAGGGTATCGATCTCGTTGGCCATGTCAAAGGCGTCGTAATCACCGCAG
TACTCGTCGTCGTTGAACAGCTGCGGAGGAAGCGGATGACGGGGCTCTGG
ATCGCTGACCGTTCCACCGTTGCTTGTCGATTTGTTTTGCATCAGCTCCT
TCTCGGATTCCTTGCCGGGCTCCGTGATGTCCACCGTGTCGTACTTGATG
TTCTTGCTGTCCAGGATCATCAGAACGCGCTGCTGGCGCTTCTTCACCTC
CTTATTGCCGGACATGCCGCTGACGTAGACTTTCAAGACCATGTCGAC
MXO02206.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:25:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8582-PA | 477 | Sh3beta-RA | 1..474 | 492..19 | 2370 | 100 | Minus |
| CG8582-PB | 477 | Sh3beta-RB | 1..474 | 492..19 | 2370 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sh3beta-RB | 1515 | CG8582-RB | 327..800 | 492..19 | 2370 | 100 | Minus |
| Sh3beta-RA | 1419 | CG8582-RA | 231..704 | 492..19 | 2370 | 100 | Minus |
| Sh3beta-RE | 2338 | CG8582-RE | 327..797 | 492..22 | 2355 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7367556..7367986 | 19..449 | 2155 | 100 | Plus |
| 3L | 28110227 | 3L | 7368886..7368934 | 444..492 | 245 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:23:44 has no hits.
MXO02206.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:16 Download gff for
MXO02206.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8582-PB | 1..477 | 16..492 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:18 Download gff for
MXO02206.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sh3beta-RA | 225..711 | 11..498 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:51 Download gff for
MXO02206.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sh3beta-RA | 225..711 | 11..498 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:51 Download gff for
MXO02206.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7367549..7367984 | 11..447 | 99 | <- | Plus |
| 3L | 7368890..7368940 | 448..498 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:18 Download gff for
MXO02206.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7360649..7361084 | 11..447 | 99 | <- | Plus |
| arm_3L | 7361990..7362040 | 448..498 | 94 | | Plus |
