MXO02208.3prime Sequence
649 bp (616 high quality bases) assembled on 2007-01-19
> MXO02208.3prime
ATGGTCTAGAAAGCTTGCGGACGCGGATCCAGCGAGTCGTTCCCGTTCCG
TTTGAAGCACCTGGCAGATCTGCTCATCGTCAGCCACGTCGTAACAAGTC
TGTCCATCTGAATCGCGTAGCTCCAGGCTGGCGTGTAGCTCCAACAGGCA
TTGGAGCGCCTCCAAGTGTCCACAACTGGCGGCGTAGTGCAGCGGAGTCT
GTTGCTCCGCATCTCGCTGATTTACACTGGCCCCACTCCGCACCAGGAAC
TGTATGATTTCGACGGCATTGCGATCGGTAGCCCAGTGGATGAGCGCCAT
GCCATGCTCGTCCAGCTTAACCAAGTCACTTGGCTGCAGCAGTTCCCTCA
GCCTGTCTAGATTGTTCTCCTTCACGTGGTCAAACAGGGTCTTTTCACTG
TCCAAACGTTGGTCCTCCAGTGGGACCGACTCAATGGAATGAACGACCCA
GCCTGGGTTGCGCCGGGACCGCCAGTTGGGTTGAAGCTCCTGCAGCTTCT
GGACGTAGGCCTGCCGGGCAGCGGACTGGGACATTGTTCCCAGATTGCGC
CAAGCCTGCCACTTGCTCTTGGCCTGCAGTTGAAGCAGACCCGGACTTTG
CTCCTTGCAGGGGCCATTCTGGCTGCTTGTATATCGAAATATAAAGGCC
MXO02208.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:26:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33713-PA | 732 | CG33713-RA | 129..729 | 619..19 | 3005 | 100 | Minus |
CG33713-PB | 732 | CG33713-RB | 129..729 | 619..19 | 3005 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:28:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33714-RB | 1279 | CG33714-RB | 534..1148 | 631..19 | 3025 | 99.7 | Minus |
CG33714-RA | 1278 | CG33714-RA | 533..1147 | 631..19 | 3025 | 99.7 | Minus |
CG33713-RB | 1278 | CG33713-RB | 533..1147 | 631..19 | 3025 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:28:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 21318067..21318667 | 19..619 | 3005 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:28:57 has no hits.
MXO02208.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:18 Download gff for
MXO02208.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33713-PB | 104..732 | 15..639 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:34 Download gff for
MXO02208.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33713-RB | 522..1150 | 15..639 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:22 Download gff for
MXO02208.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33713-RB | 522..1150 | 15..639 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:22 Download gff for
MXO02208.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 21318064..21318691 | 15..639 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:34 Download gff for
MXO02208.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 21189091..21189718 | 15..639 | 98 | | Plus |
MXO02208.5prime Sequence
753 bp (684 high quality bases) assembled on 2007-01-19
> MXO02208.5prime
CAGTCGACATGTCGGACAGCGATACGGACACCGTGGACGAGCTTTTCCAC
CTTGCCACCGAGCATGTGGCCAAGCAGTCAAACAGCATTGGTTCCGCGGA
CCTTTTAATATTTTACGGATACTACAAGCAGGCCACGAATGGCCCCTGCA
AGGAGCAAAGTCCGGGTCTGCTTCAACTGCAGGCCAAGAGCAAGTGGCAG
GCTTGGCGCAATCTGGGAACAATGTCCCAGTCCGCTGCCCGGCAGGCCTA
CGTCCAGAAGCTGCAGGAGCTTCAACCCAACTGGCGGTCCCGGCGCAACC
CAGGCTGGGTCGTTCATTCCATTGAGTCGGTCCCACTGGAGGACCAACGT
TTGGACAGTGAAAAGACCCTGTTTGACCACGTGAAGGAGAACAATCTAGA
CAGGCTGAGGGAACTGCTGCAGCCAAGTGACTTGGTTAAGCTGGACGAGC
ATGGCATGGCGCTCATCCACTGGGCTACCGATCGCAATGCCGTCGAAATC
ATACAGTTCCTGGTGCGGAGTGGGGCCAGTGTAAATCAGCGAGATGCGGA
GCAACAGACTCCGCTGCACTACGCCGCCAGTTGTGGACACTTGGAGGCGC
TCCAATGCCTGTTGGAGCTACACGCCAGCCTGGAGCTACGCGATTCAGAT
GGACAGACTTGTTACGACGTGGCTGACGATGAGCAGATGTGCCAGGTGCT
TCAAACGGAACGGGAACGACTCGCTGGATCCGCGTCCGCAAGCTTTCTAG
ACC
MXO02208.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:26:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33713-PA | 732 | CG33713-RA | 1..729 | 9..737 | 3620 | 99.8 | Plus |
CG33713-PB | 732 | CG33713-RB | 1..729 | 9..737 | 3620 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33714-RB | 1279 | CG33714-RB | 417..1148 | 6..737 | 3645 | 99.9 | Plus |
CG33714-RA | 1278 | CG33714-RA | 416..1147 | 6..737 | 3645 | 99.9 | Plus |
CG33713-RB | 1278 | CG33713-RB | 416..1147 | 6..737 | 3645 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 21318067..21318798 | 737..6 | 3645 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:30:02 has no hits.
MXO02208.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:19 Download gff for
MXO02208.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33713-PB | 1..732 | 9..741 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:35:36 Download gff for
MXO02208.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33713-RB | 411..1150 | 1..741 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:34 Download gff for
MXO02208.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33713-RB | 411..1150 | 1..741 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:34 Download gff for
MXO02208.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 21318064..21318799 | 1..741 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:35:36 Download gff for
MXO02208.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 21189091..21189826 | 1..741 | 99 | | Minus |