MXO02209.3prime Sequence
844 bp (717 high quality bases) assembled on 2007-01-19
> MXO02209.3prime
ATGGTCTAGAAAGCTTGCCAACTTGGATTTTTGCTTCTTAAGCATTTCCC
GCAGAATGCGACGCAGAATCTTGCCACTGGGGTTCTTTGGAATTTCGTCA
ACAAAGATCACGCCACCCCTTAGACGCTTGGCGGGCGAGGCGTTGTCGTT
GACAAACTGAATGACTTCGTTCTCGGTCAGTTGAACATTAGCCTGTTTGA
CCACAAATGCCAGCGGCAGCTCGCCAGCCTCCTCGTCTGGCTTTCCAATG
ACCGCCGCATCCTTAATCTTGTCGTTGGTGAGCAGCAGAGCCTCAATCTC
TGCCGGCGGCACCTGGTATCCCTTGTATTTGATCAGCTCCTTGATGCGGT
CCACGATGAAGAACTCAAAATCATCATCATAGTAGCCAATATCGCCAGTA
TGCAACCAACCGTCCTTGATGGCGGTCTGCGTGGACTTCGTATCTCCGAT
GTAGCCCTTCATGATGCCGTCGCCTTTAAAACAAAGCTCGCCGCGCTCGT
TGGCCCCCAATAGCTTGCCGGTGTCGGGATCGATCACCTTGGCATAGATT
CCCACCTTAAGAACGCCCACACTGCCTGGCTTGCAGAACTCATCGTTCTG
CACCAGAACACTCAGCGTTGATTCGCTGAGGCCGTATCCCTGTCGGATGA
ATGGCACTCCAATACGCTCCTTGATCTGATCCTCAGTTTCGCGACTGAGT
GGAGCTGCTCCACACAGCAGGACCATCAAAGAGGACAAATCGTACTTAAT
CACGATGGGGTGTTTAGCCAAAAAGACCATCAGTGGTGGCACCATGAAAG
CCATCATCACGCGATACTTTTCAATGGCAGAAAGGAAGAGCTTT
MXO02209.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:26:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6178-PA | 1635 | CG6178-RA | 807..1632 | 844..19 | 4055 | 99.6 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:45:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6178-RA | 2008 | CG6178-RA | 1071..1896 | 844..19 | 4085 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:45:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24153959..24154784 | 844..19 | 4085 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:45:46 has no hits.
MXO02209.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:19 Download gff for
MXO02209.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6178-PA | 807..1635 | 15..844 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:08 Download gff for
MXO02209.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6178-RA | 1071..1900 | 14..844 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:35:52 Download gff for
MXO02209.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6178-RA | 1071..1900 | 14..844 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:35:52 Download gff for
MXO02209.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24153959..24154788 | 14..844 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:08 Download gff for
MXO02209.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19979681..19980510 | 14..844 | 99 | -> | Minus |
MXO02209.5prime Sequence
864 bp (792 high quality bases) assembled on 2007-01-19
> MXO02209.5prime
CAGTCGACATGACCTCAAAGCTACTGCCCGGAAACATTGTGTACGGAGGT
CCTGTGACTGAACGACAGGCCCAGGATAGCAGATCCTTGGGTCAGTACAT
CCTCGACAAGTACAAGAGCTTTGGCGACCGGACGGTGCTGGTGGATGCCG
TCAATGGAGTGGAGTACTCTGCCAGTTTCATGCACAAGTCCATTGTACGG
CTGGCATACATCCTTCAAAAACTGGGAGTCAAACAGAATGACGTCGTTGG
TTTGTCTAGCGAAAACAGCGTCAACTTCGCCCTGGCCATGTTCGCTGGTC
TAGCAGTTGGGGCTACGGTTGCTCCCCTTAACGTAACATATTCCGATCGT
GAGGTGGACCACGCCATTAACTTGTCCAAGCCAAAGATCATATTCGCCTC
TAAGATTACCATTGATCGTGTTGCCAAAGTGGCCAGCAAGAATAAGTTCG
TCAAGGGCATCATTGCGCTCAGTGGAACTTCCAAGAAATTTAAGAACATC
TATGATCTTAAGGAGCTGATGGAGGACGAGAAGTTCAAGACACAGCCTGA
CTTCACGAGCCCTGCGGCCAATAAGGACGAGGACGTGTCTCTTATTGTGT
GCTCTTCTGGAACCACCGGACTTCCTAAAGGAGTGCAGCTGACCCAAATG
AACCTGCTGGCCACTCTCGACTCACAAATCCAACCCACTGTCATTCCAAT
GGAGGAGGTCACTCTACTCACTGTCATTCCCTGGTTCCACGCCTTCGGCT
GTCTGACGCTTATCACCACCGCCTGCGTTGGCGCACGATTGGTATACCTG
CCCCAGTTCGAGGAAAAGCTCTTCCTTTCTGCCATTGAAAAGTATCGCGT
GATGATGGCCTTCA
MXO02209.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:26:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6178-PA | 1635 | CG6178-RA | 1..856 | 9..864 | 4230 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:32:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6178-RA | 2008 | CG6178-RA | 265..1120 | 9..864 | 4250 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:32:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24153097..24153767 | 9..679 | 3340 | 99.9 | Plus |
| 3R | 32079331 | 3R | 24153824..24154008 | 680..864 | 910 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:32:42 has no hits.
MXO02209.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:20 Download gff for
MXO02209.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6178-PA | 1..855 | 9..863 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:36:33 Download gff for
MXO02209.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6178-RA | 257..1119 | 1..863 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:25:53 Download gff for
MXO02209.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6178-RA | 257..1119 | 1..863 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:25:53 Download gff for
MXO02209.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24153091..24153767 | 1..679 | 99 | -> | Plus |
| 3R | 24153824..24154007 | 680..863 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:36:33 Download gff for
MXO02209.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19978813..19979489 | 1..679 | 99 | -> | Plus |
| arm_3R | 19979546..19979729 | 680..863 | 99 | | Plus |
