MXO02212.3prime Sequence
516 bp (516 high quality bases) assembled on 2007-01-19
> MXO02212.3prime
ATGGTCTAGAAAGCTTGCGAGGGCTCCGCAGTCTTCGATAATTACTTTCT
TGCTGGTCTTCCCATCTTGTGAACCGTAAGATTCTACCTTCTGGACGATA
TCCATTCCCTCAACGACCTTGCCGAACACGACATGCTTATTATCCAGCCA
TGTGGTTTTCCCGGTGCAAATGAAAAACTGAGATCCATTGGTATTGGCCC
CAGCATTGGCCATCGAAAGTACACCAGCTCCGGTATGCTTTAGCTCGAAA
TTCTCATCGGGAAACTTGTTTCCATAAATGGAGCGTCCTCCAGTTCCGTT
TTGATTAGTGAAATCACCGCCCTGACACATGAAATTCGGGATGACGCGGT
GGAATGGTGATCCCTTGTAGCCGTACCCCTTCTCTCCGGTGCAGAGGGCC
CGGAAATTCTCCGCCGTCTTGGGCACCACATCCGAACGTAGTTCCATCAC
AATTCTACCTAACTTCTCACCTCCTGCGGCTATATCGAAGTAAACGCGTG
GCAACGACATGTCGAC
MXO02212.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:27:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7768-PB | 495 | CG7768-RB | 1..492 | 510..19 | 2460 | 100 | Minus |
| CG7768-PA | 495 | CG7768-RA | 1..492 | 510..19 | 2460 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:50:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7768-RB | 679 | CG7768-RB | 88..579 | 510..19 | 2460 | 100 | Minus |
| CG7768-RA | 717 | CG7768-RA | 126..617 | 510..19 | 2460 | 100 | Minus |
| Cyp1-RA | 1227 | CG9916-RA | 287..687 | 447..47 | 745 | 79.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:49:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14218383..14218874 | 510..19 | 2460 | 100 | Minus |
| X | 23542271 | X | 16318213..16318598 | 47..432 | 730 | 79.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:50:00 has no hits.
MXO02212.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:21 Download gff for
MXO02212.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7768-PA | 1..495 | 16..510 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:38 Download gff for
MXO02212.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7768-RA | 119..621 | 14..516 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:34:24 Download gff for
MXO02212.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7768-RA | 120..622 | 14..516 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:34:24 Download gff for
MXO02212.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14218377..14218879 | 14..516 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:38 Download gff for
MXO02212.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14211477..14211979 | 14..516 | 99 | | Minus |
MXO02212.5prime Sequence
516 bp (516 high quality bases) assembled on 2007-01-19
> MXO02212.5prime
CAGTCGACATGTCGTTGCCACGCGTCCCTTTAGATATCCCCGCAGGAGGT
GAGAAGTTAGGTAGAATTGTGATGGAACTACGTTCGGATGTGGTGCCCAA
CCCAGAGGAGAATTTCCGGGCCCTCTGCACCGGAGAGAAGGGGTACGGCT
ACAAGGGATCACCATTCCACCGCGTCATCCCGAATTTCATGTGTCAGGGC
GGTGATTTCACTAATCAAAACGGAACTGGAGGACGCTCCATTTATGGAAA
CAAGTTTCCCGATGAGAATTTCGAGCTAAAGCATACCGGAGCTGGTGTAC
TTTCGATGGCCAATGCTGGGGCCAATACCATTGGATCTCAGTTTTTCATT
TGCACCGGGAAAACCACATGGCTGGATAATTTTTTTTTCCCCCCCGGCAA
GGTCGTTGAGGGAATGGATAAAATACAGAAGGTAGAATCTTACGGTTCAC
AAGATGGGAAGACCAGCAAGAAAGTAATTATCGAAGACTGCGGAGCCCTC
GCAAGCTTTCTAGACC
MXO02212.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:27:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7768-PB | 495 | CG7768-RB | 99..372 | 107..380 | 1345 | 99.6 | Plus |
| CG7768-PA | 495 | CG7768-RA | 99..372 | 107..380 | 1345 | 99.6 | Plus |
| CG7768-PB | 495 | CG7768-RB | 418..492 | 426..500 | 375 | 100 | Plus |
| CG7768-PA | 495 | CG7768-RA | 418..492 | 426..500 | 375 | 100 | Plus |
| CG7768-PB | 495 | CG7768-RB | 32..92 | 40..100 | 305 | 100 | Plus |
| CG7768-PA | 495 | CG7768-RA | 32..92 | 40..100 | 305 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7768-RB | 679 | CG7768-RB | 88..579 | 9..500 | 2055 | 94.5 | Plus |
| CG7768-RA | 717 | CG7768-RA | 126..617 | 9..500 | 2055 | 94.5 | Plus |
| Cyp1-RA | 1227 | CG9916-RA | 287..591 | 72..376 | 520 | 78.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14218383..14218874 | 9..500 | 2055 | 94.5 | Plus |
| X | 23542271 | X | 16318309..16318598 | 376..87 | 505 | 78.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:02:49 has no hits.
MXO02212.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:22 Download gff for
MXO02212.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7768-PA | 1..495 | 9..503 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:22:56 Download gff for
MXO02212.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7768-RA | 117..621 | 1..505 | 93 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:49:45 Download gff for
MXO02212.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7768-RA | 118..622 | 1..505 | 93 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:49:45 Download gff for
MXO02212.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14218375..14218879 | 1..505 | 93 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:22:56 Download gff for
MXO02212.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14211475..14211979 | 1..505 | 93 | | Plus |
