MXO02214.3prime Sequence
731 bp (728 high quality bases) assembled on 2007-01-19
> MXO02214.3prime
ATGGTCTAGAAAGCTTGCGTACTTAATAATGGATCGGATACTCTCGCCCT
TGTGCATCAGATCGAATGCCTCGTTGATCTGCGACAGCGGCAGCTCGTGG
GTGATGAACTCGTCCACCAGCAGATCCTTCTTCAGGTAGTCCTCCACCAA
TTTGGGAACATCGGAAACGGAGCGCCAGCCTCCGAAGGCGGAACCCTTCC
ACACGCGACCCACGACCAGCTGGAAGGGTCGCGTGGAAATCTCCTGTCCA
GCACCGGCCACTCCGATCACCACCGAAGTGCCCCAACCCTTGTGTGTGGC
CTCCAAAGCGGAGCGCATGGTGTTCACATTGCCAATGCATTCGAAGGTGT
AATCGAATCCACCATCGGTCAGATCGATCAGGTAGTTCTGGATCGAACCC
TTGTCGGCCACATCCTTGGGGTTGACAAAGTCGGTGAATCCAAACTTCTT
GGCCAGCTCAAACTTGTCGGGATTGATGTCAATGCCGTAGATCTTGCCGG
CACCAGCCTTCTTGCAGCCCAAACCCACGGCCAAGCCCACAGCTCCCAAG
CCCCAAACAGCGCAGGTGCTACCGGCTTCCACCTTGGCAGTGTTGAGGGC
GGCTCCGTAGCCTGTGGAAATGCCGCACCCCAGCAGGCAGACTTTCTCCA
GCGGCGCCTTTTCGTTGATCTTTGTCAGCGAAATGTCGGCCACTACGGTG
TACTCTGCGAAGGTGGAGGTGCCCATGAAGT
MXO02214.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:27:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6598-PA | 1140 | Fdh-RA | 425..1137 | 731..19 | 3515 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fdh-RA | 1337 | CG6598-RA | 531..1243 | 731..19 | 3535 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10871000..10871712 | 19..731 | 3535 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:23:53 has no hits.
MXO02214.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:23 Download gff for
MXO02214.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6598-PA | 425..1140 | 15..731 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:20 Download gff for
MXO02214.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fdh-RA | 531..1248 | 13..731 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:54 Download gff for
MXO02214.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fdh-RA | 531..1248 | 13..731 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:54 Download gff for
MXO02214.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10870995..10871712 | 13..731 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:20 Download gff for
MXO02214.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6696717..6697434 | 13..731 | 99 | | Plus |
MXO02214.5prime Sequence
614 bp (613 high quality bases) assembled on 2007-01-19
> MXO02214.5prime
GCGGCCGCGACGTCCACATATACCTGCCGTTCACTATTATTTAGTGAAAT
GAGATATTATGATATTTTCTGAATTGTGATTAAAAAGGCAACTTTATGCC
CATGCAACAGAAACTATAAAAAATACAGAGAATGAAAAGAAACAGATAGA
TTTTTTAGTTCTTTAGGCCCGTAGTCTGCAAATCCTTTTATGATTTTCTA
TCAAACAAAAGAGGAAAATAGACCAGTTGCAATCCAAACGAGAGTCTAAT
AGAATGAGGTCGAAAAGTAAATCGCGCGGGTTTGTTACTGATAAAGCAGG
CAAGACCTAAAATGTGTAAAGGGCAAAGTGTATACTTTGGCGTCACCCCT
TACATATTTTAGGTCTTTTTTTATTGTGCGTAACTAACTTGCCATCTTCA
AACAGGAGGGCTGGAAGAAGCAGACCGCTAACACAGTACATAAAAAAGGA
GACATGAACGATGAACATCAAAAAGTTTGCAAAACAAGCAACAGTATTAA
CCTTTACTACCGCACTGCTGGCAGGAGGCGCAACTCAAGCGTTTGCGAAA
GAAACGAACCAAAAGCCATATAAGGAAACATACGGCATTTCCCATATTAC
ACGCCATGATATGC
MXO02214.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-10 05:27:53 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 22:29:06 has no hits.
Blast to na_all.dmel.RELEASE6 performed on 2014-11-28 22:29:04 has no hits.
Blast to na_te.dros performed on 2014-11-28 22:29:05 has no hits.
MXO02214.5prime Sim4 Records
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 23:00:27 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 23:00:27 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 01:04:38 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 01:04:38 has no hits.
