MXO02215.3prime Sequence
604 bp (571 high quality bases) assembled on 2007-01-19
> MXO02215.3prime
ATGGTCTAGAAAGCTTGCGTCATCGTCCTCATCGTCCAGATCTAGGTCAT
CCAGTTCGCCGGCCAGATCAACAAAGAGATCCTTGTTGATGGGGGCAGCA
TCGTTGGCGGGTGCAGACGACGATGGGCCATCCTCGTCGGCCGCTGCGTC
CTCGGCTGCGGCGGTTTTGGCTGCTTCGGTTGCCTGGTCCAGTAGTCGAT
TGGTGGAGGCAATGGTGCCCGAGCCGTCCACCTCCTTGGCGGCCAGCGAC
AGGGCAGCCAGATCCAGTTCCTTGAACTCGACGGCATTATCGTCGTCGTC
CTCCCTGTTGTAGACGTCGAAAGCAGCGTCGCCCTCCTCCATGGGTCCGT
CGTCGACCAGATCCGGATTGAAGCTGAACATTTCCCGACCAGAGATGCCG
AACTGTTTGCCCTTGCTGAAGTCACTCTTCTTGCGCTCTTCCTCGGCAGC
CAGCTTGGCCTTCTTCTCGGCAATCTTGCGCTTCTTCCAGGCGAGGAAGG
ACTCGAGGGTGACGCGTGTCTGGTTGGGACCGAGGGCAGCGCGCTCCTTC
TCAATTAAATCGACCAGCGAGATTCCCGTGGGCTTTTCCACCTTCTTCTT
ATCG
MXO02215.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:28:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8635-PA | 1215 | CG8635-RA | 627..1212 | 604..19 | 2855 | 99.4 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:45:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8635-RB | 1447 | CG8635-RB | 760..1345 | 604..19 | 2885 | 99.5 | Minus |
| CG8635-RA | 1572 | CG8635-RA | 885..1470 | 604..19 | 2885 | 99.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:45:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8630309..8630894 | 19..604 | 2885 | 99.5 | Plus |
Blast to na_te.dros performed 2014-11-28 18:45:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| R1A1-element | 5356 | R1A1-element DMRER1DM 5356bp Derived from X51968 (g8429) (Rel. 23, Last updated, Version 1). | 571..643 | 135..66 | 106 | 63 | Minus |
MXO02215.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:23 Download gff for
MXO02215.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8635-PA | 627..1215 | 18..604 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:11 Download gff for
MXO02215.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8635-RA | 885..1470 | 19..604 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:35:54 Download gff for
MXO02215.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8635-RA | 885..1470 | 19..604 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:35:54 Download gff for
MXO02215.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8630309..8630894 | 19..604 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:11 Download gff for
MXO02215.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4517814..4518399 | 19..604 | 99 | | Plus |
MXO02215.5prime Sequence
772 bp (738 high quality bases) assembled on 2007-01-19
> MXO02215.5prime
GCGGCCGCGACGTCCACATATACCTGCCGTTCACTATTATTTAGTGAAAT
GAGATATTATGATATTTTCTGAATTGTGATTAAAAAGGCAACTTTATGCC
CATGCAACAGAAACTATAAAAAATACAGAGAATGAAAAGAAACAGATAGA
TTTTTTAGTTCTTTAGGCCCGTAGTCTGCAAATCCTTTTATGATTTTCTA
TCAAACAAAAGAGGAAAATAGACCAGTTGCAATCCAAACGAGAGTCTAAT
AGAATGAGGTCGAAAAGTAAATCGCGCGGGTTTGTTACTGATAAAGCAGG
CAAGACCTAAAATGTGTAAAGGGCAAAGTGTATACTTTGGCGTCACCCCT
TACATATTTTAGGTCTTTTTTTATTGTGCGTAACTAACTTGCCATCTTCA
AACAGGAGGGCTGGAAGAAGCAGACCGCTAACACAGTACATAAAAAAGGA
GACATGAACGATGAACATCAAAAAGTTTGCAAAACAAGCAACAGTATTAA
CCTTTACTACCGCACTGCTGGCAGGAGGCGCAACTCAAGCGTTTGCGAAA
GAAACGAACCAAAAGCCATATAAGGAAACATACGGCATTTCCCATATTAC
ACGCCATGATATGCTGCAAATCCCTGAACAGCAAAAAAATGAAAAATATA
AAGTTCCTGAGTTCGATTCGTCCACAATTAAAAATATCTCTTCTGCAAAA
GGCCTGGACGTTTGGGACAGCTGGCCATTACAAAACACTGACGGCACTGT
CGCAAACTATCACGGCTACCAC
MXO02215.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-10 05:28:11 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 19:52:50 has no hits.
Blast to na_all.dmel.RELEASE6 performed on 2014-11-28 19:52:48 has no hits.
Blast to na_te.dros performed on 2014-11-28 19:52:49 has no hits.
MXO02215.5prime Sim4 Records
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:29:42 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:29:42 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 22:44:20 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 22:44:20 has no hits.
