MXO02222.3prime Sequence
677 bp (665 high quality bases) assembled on 2007-01-19
> MXO02222.3prime
ATGGTCTAGAAAGCTTGCCTGCGCCTTCTCCTTCTCTATTGCGGCGGCGA
TTCCGTCGCCACCAGCTGCTTTCTCTGCCGCGCGCTTCTTTCTACGTTCG
GCCGCTTTTCTCTGGCTGGTGAGGTAAAAGCCTAACGCAGTCATGGCCGC
CCAACTGATGTAGCCAATATGATAGACAGAGCTATAGAACCGCCAGATGT
TGCCAAAGGAGGAGAGCAGGAAGGCCTCGCCCAAGTAGCTGAAGGCGAAC
CACTTAAAGATCCAGAAGATGACATCGATTACCCTGCGGCTGGTGCCGGT
GGCACTCTTGCGCACCAGCTTATCCCACATGTCCTCCAGGGAGACGTAGA
AGGGAGCGCCCATGATGCAGAAGTAGTGTCCCGGCCGGAATCCGTGCCAG
TAGGCAGAGCACAGCAAAGTGGCGCCAGTCCTGTACTTTTTGCTGGGGAA
GAGTTTGTACACATTGACAGCCAACCAATACTGGACGCACACATTCCAGT
GCTTCATGCCCTCGCGGAAGGTCCAGCATCTTTCCACCTCCAGAACCCTG
GTGTTCACGATCGTTGTAAAGTTGTAGGTGTGCTTATCGGCGTCGCGCTT
TAGGTGCTGATAGCGTTTCCGAGGGCCCTCGCCATTGTTGGGATCGGATT
CATCCGGAAGGCTCCGAACCGGCCATG
MXO02222.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:29:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9526-PB | 1470 | CG9526-RB | 808..1467 | 676..19 | 3220 | 99.6 | Minus |
| CG9526-PA | 1470 | CG9526-RA | 808..1467 | 676..19 | 3220 | 99.6 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| frj-RA | 2097 | CG9526-RA | 1012..1671 | 676..19 | 3250 | 99.7 | Minus |
| frj-RB | 2156 | CG9526-RB | 1071..1730 | 676..19 | 3250 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6458169..6458582 | 432..19 | 2070 | 100 | Minus |
| 2L | 23513712 | 2L | 6457678..6457917 | 668..430 | 1150 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:15:52 has no hits.
MXO02222.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:29 Download gff for
MXO02222.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9526-PA | 806..1470 | 18..677 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:33:03 Download gff for
MXO02222.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| frj-RB | 1069..1730 | 19..677 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:39 Download gff for
MXO02222.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| frj-RB | 1069..1730 | 19..677 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:39 Download gff for
MXO02222.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6457667..6457916 | 431..677 | 98 | -> | Minus |
| 2L | 6458171..6458582 | 19..430 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:33:03 Download gff for
MXO02222.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6457667..6457916 | 431..677 | 98 | -> | Minus |
| arm_2L | 6458171..6458582 | 19..430 | 100 | | Minus |
MXO02222.5prime Sequence
789 bp (771 high quality bases) assembled on 2007-01-19
> MXO02222.5prime
GCGGCCGCGACGTCCACATATACCTGCCGTTCACTATTATTTAGTGAAAT
GAGATATTATGATATTTTCTGAATTGTGATTAAAAAGGCAACTTTATGCC
CATGCAACAGAAACTATAAAAAATACAGAGAATGAAAAGAAACAGATAGA
TTTTTTAGTTCTTTAGGCCCGTAGTCTGCAAATCCTTTTATGATTTTCTA
TCAAACAAAAGAGGAAAATAGACCAGTTGCAATCCAAACGAGAGTCTAAT
AGAATGAGGTCGAAAAGTAAATCGCGCGGGTTTGTTACTGATAAAGCAGG
CAAGACCTAAAATGTGTAAAGGGCAAAGTGTATACTTTGGCGTCACCCCT
TACATATTTTAGGTCTTTTTTTATTGTGCGTAACTAACTTGCCATCTTCA
AACAGGAGGGCTGGAAGAAGCAGACCGCTAACACAGTACATAAAAAAGGA
GACATGAACGATGAACATCAAAAAGTTTGCAAAACAAGCAACAGTATTAA
CCTTTACTACCGCACTGCTGGCAGGAGGCGCAACTCAAGCGTTTGCGAAA
GAAACGAACCAAAAGCCATATAAGGAAACATACGGCATTTCCCATATTAC
ACGCCATGATATGCTGCAAATCCCTGAACAGCAAAAAAATGAAAAATATA
AAGTTCCTGAGTTCGATTCGTCCACAATTAAAAATATCTCTTCTGCAAAA
GGCCCTGGACGTTTGGGACAGCTGGCCATTACAAAACACTGACGGCACTG
TCGCAAACTATCACGGCTACCACATCGTCTTTGCATTAG
MXO02222.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-10 05:30:00 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 23:33:58 has no hits.
Blast to na_all.dmel.RELEASE6 performed on 2014-11-28 23:33:56 has no hits.
Blast to na_te.dros performed on 2014-11-28 23:33:57 has no hits.
MXO02222.5prime Sim4 Records
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-29 00:17:17 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-29 00:17:17 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 01:28:50 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 01:28:50 has no hits.
