MXO02224.3prime Sequence
382 bp (344 high quality bases) assembled on 2007-01-19
> MXO02224.3prime
AGGGTCTAGAAAGCTTGGTTTTNTCTCAATAGCTTCTTTTGGTGGTCCCA
CCTATCCAAGAGCTCCTTTAGTCGTTCCCTTCGATGTTCCAGTTGCAACT
TCTCTATTAGTCCACTCAGTTGGTCGCCGCCCTTGAGGAAACCATTGAGG
TTGTGCAGCGTACCGCCTTGAATTCGATGATCCGTTATGCGGTCCTGGAC
GAAATTGTAGGTACGGATCTTCTCATTGCGATTGAGACTACCCTGTTGCG
CCTTCTTGGTGGCCATTTTGCTAGCCTCAACGCTCTCCAACTGCTGTTGC
ACAAGTCGCGACCGTAGACGCTTCATCGCTAGCTCCCGGTTTTTGAGCTG
GGAGCGTTCCGATTGCGCCTCCACCGCCAGAC
MXO02224.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:30:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5705-PA | 1179 | CG5705-RA | 812..1175 | 382..20 | 1761 | 99.4 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5705-RA | 1420 | CG5705-RA | 920..1283 | 382..20 | 1784 | 99.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13220898..13221261 | 382..20 | 1759 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:15:55 has no hits.
MXO02224.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:30 Download gff for
MXO02224.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5705-PA | 812..1179 | 14..382 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:33:06 Download gff for
MXO02224.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5705-RA | 920..1294 | 8..382 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:40 Download gff for
MXO02224.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5705-RA | 920..1294 | 8..382 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:40 Download gff for
MXO02224.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13220898..13221272 | 8..382 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:33:06 Download gff for
MXO02224.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13220898..13221272 | 8..382 | 98 | | Minus |
MXO02224.5prime Sequence
857 bp (720 high quality bases) assembled on 2007-01-19
> MXO02224.5prime
CAGTCGACATGATATCGCGCAAACTACTAAACCTTCGACTGGGTTACCTG
GCACGCCGTTGGGCCAGCACGGATCCGCTGAGCATTCAGAACGAGAAGCT
GCAGGCTTATTTGGAGTCTCTACGCCAGGAATACTACGCCGTGCGAGTCA
ACGCCGCCGGAAACAGCAAATCCTACGCCCGTCTCGCCCAGCTGGAGGGC
GTGGTCAGTGCCCTGGAGCAGCGACGCGTACTAGAACGGCACATCACCAG
CGCCAAGGACATGGAAGCGGAGAAGGACGAGGATATGCGTGAGCTAATGC
GCGAGGAGAACGAAGTCTATGTGGATCTACTGGGCAAGCAGGATCAGGCC
TTACTGCAGGAGCTGCTTACGCTCTCTGACGATGAGGAGTATCCGGCTCT
GATCTTCGGCCTGAATGCCGGCGCCGGTGGCCAGGAGGCAATGCTATTCG
CCCAAGAATTGTACGAAATGTACACCGGCTATTTCGAGCACATGGGCTGG
GAGTGGGAGGAGTTTGCCAGCGAGGGCACCGACATCGGGGGTCTGCGGCA
CGCTAGTCTGATGGTGAGCGGCGAGGATGCCTTCCGCTGGCTGCGCTATG
AGGCTGGAGTTCACCGCGTACAGCGGGTGCCGGCCACTGAAAAGTCTGGA
CGCATGCACACCAGCACCGCCTCAATTACAGTGATTCCCCGACCCGCCGA
CATCCAAGTGCACATCGCTGAGAAGGATCTGAAGATCGAGACGAAGCGAG
CGAGTGGAGCTGGTGGACAGCATGTTAACACCACCGACTCGGCTGTAAGA
ATTGTTCATCTGCCCACGGGTCTGGCGGTGGAGGCGCAATCGGAACGCTC
CCAGCTC
MXO02224.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:30:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5705-PA | 1179 | CG5705-RA | 1..849 | 9..857 | 4245 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:45:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5705-RA | 1420 | CG5705-RA | 109..957 | 9..857 | 4245 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:45:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13220087..13220935 | 9..857 | 4245 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:45:30 has no hits.
MXO02224.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:31 Download gff for
MXO02224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5705-PA | 1..849 | 9..857 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:12 Download gff for
MXO02224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5705-RA | 101..957 | 1..857 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:03 Download gff for
MXO02224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5705-RA | 101..957 | 1..857 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:03 Download gff for
MXO02224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13220079..13220935 | 1..857 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:12 Download gff for
MXO02224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13220079..13220935 | 1..857 | 99 | | Plus |
