MXO02226.3prime Sequence
763 bp (741 high quality bases) assembled on 2007-01-19
> MXO02226.3prime
ATGGTCTAGAAAGCTTGCCTCCTCTCTCCGTTCCGTTGTCGCAACTCTTG
CTCCTGCTCTTGATCCTGCTCCTCCGGCAGATCCTTTATCCGATGGCGCA
CTGCTGATCGACTTGTTCTTGGAGCGCGCCGAGCCATTGGTCAGACGTGC
ATTCCCCGAACTGTCTGTGAGATCCTCACTATCACTGGAACGTATGTCAC
CGGACATCAGACCCTTCTGCAGAGAGTCGACAACAATCTTGAGGATCATG
TATGTCCAGATGACGTGCAGGACGAGCAGCATCAGAAGCAGTGAGTTGAA
GATGTAGTAGGCTGGGAACATGGGCAGAATGCGCGGTGCTTCCACGGATG
AGCTATAAATGATGCGTGGATAGAAGCCCAGACGCGTAACAATCCACACC
ACTGTGAAGATGGCAAAGATTGCATCGCAGAGCTTCTGATATTTGGCATA
TTTGGTGAGTTTGGCGGCCTCCAAGAAGATGTCAGCACAATCGTGAACGA
CTAGGACGAGCGAACCGACGCGATGCAGATTGCACACCCAGCTGAGCGAC
ATTAGGAGCAGGGTGACCATGTGATGGATGAACATCTGCCAGAAGTCCTT
GCGTTTCACATCGAAAAACTGGGTGCCAGTGAGTGACCAGTAGAAGGACA
TCGAAATCATGTAGTACCACCAGATATCATTGCTGATCGACTGATGCGGG
TAGCCGTACCAGCCAGCTCTTCACATCCCAAAACCAGGGCTTGCCCCACA
GCACGATCACGCC
MXO02226.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:30:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3576-PA | 1203 | Lag1-RA | 457..1200 | 763..19 | 3635 | 99.5 | Minus |
| CG3576-PB | 1203 | Lag1-RB | 457..1200 | 763..19 | 3635 | 99.5 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| schlank-RB | 2487 | CG3576-RB | 1094..1837 | 763..19 | 3670 | 99.6 | Minus |
| schlank-RA | 2201 | CG3576-RA | 808..1551 | 763..19 | 3670 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6258897..6259237 | 353..693 | 1690 | 99.7 | Plus |
| X | 23542271 | X | 6258318..6258507 | 19..208 | 950 | 100 | Plus |
| X | 23542271 | X | 6258650..6258796 | 208..354 | 735 | 100 | Plus |
| X | 23542271 | X | 6259312..6259383 | 691..763 | 300 | 97.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:21:17 has no hits.
MXO02226.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:31 Download gff for
MXO02226.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3576-PB | 457..1203 | 18..763 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:56 Download gff for
MXO02226.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| schlank-RA | 808..1556 | 12..763 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:03:16 Download gff for
MXO02226.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| schlank-RA | 808..1556 | 12..763 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:03:16 Download gff for
MXO02226.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6258313..6258506 | 12..207 | 98 | <- | Plus |
| X | 6258650..6258794 | 208..352 | 100 | <- | Plus |
| X | 6258897..6259234 | 353..690 | 99 | <- | Plus |
| X | 6259312..6259383 | 691..763 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:56 Download gff for
MXO02226.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6152346..6152539 | 12..207 | 98 | <- | Plus |
| arm_X | 6152683..6152827 | 208..352 | 100 | <- | Plus |
| arm_X | 6152930..6153267 | 353..690 | 99 | <- | Plus |
| arm_X | 6153345..6153416 | 691..763 | 97 | | Plus |
MXO02226.5prime Sequence
808 bp (732 high quality bases) assembled on 2007-01-19
> MXO02226.5prime
GCGGCCGCGACGTCCACATATACCTGCCGTTCACTATTATTTAGTGAAAT
GAGATATTATGATATTTTCTGAATTGTGATTAAAAAGGCAACTTTATGCC
CATGCAACAGAAACTATAAAAAATACAGAGAATGAAAAGAAACAGATAGA
TTTTTTAGTTCTTTAGGCCCGTAGTCTGCAAATCCTTTTATGATTTTCTA
TCAAACAAAAGAGGAAAATAGACCAGTTGCAATCCAAACGAGAGTCTAAT
AGAATGAGGTCGAAAAGTAAATCGCGCGGGTTTGTTACTGATAAAGCAGG
CAAGACCTAAAATGTGTAAAGGGCAAAGTGTATACTTTGGCGTCACCCCT
TACATATTTTAGGTCTTTTTTTATTGTGCGTAACTAACTTGCCATCTTCA
AACAGGAGGGCTGGAAGAAGCAGACCGCTAACACAGTACATAAAAAAGGA
GACATGAACGATGAACATCAAAAAGTTTGCAAAACAAGCAACAGTATTAA
CCTTTACTACCGCACTGCTGGCAGGAGGCGCAACTCAAGCGTTTGCGAAA
GAAACGAACCAAAAGCCATATAAGGAAACATACGGCATTTCCCATATTAC
ACGCCATGATATGCTGCAAATCCCTGAACAGCAAAAAAATGAAAAATATA
AAGTTCCTGAGTTCGATTCGTCCACAATTAAAAATATCTCTTCTGCAAAA
GGCCTGGACGTTTGGGACAGCTGGCCATTACAAAACCTGACGGCACTGTC
GCAAACTATCACGGCTACCACATCGTCTTTGCATTAACCGGAGATCCTAA
AAATGCGG
MXO02226.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-10 05:30:58 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 22:18:47 has no hits.
Blast to na_all.dmel.RELEASE6 performed on 2014-11-28 22:18:45 has no hits.
Blast to na_te.dros performed on 2014-11-28 22:18:46 has no hits.
MXO02226.5prime Sim4 Records
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 23:04:50 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 23:04:50 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 00:47:29 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 00:47:29 has no hits.
