MXO02228.3prime Sequence
750 bp (748 high quality bases) assembled on 2007-01-19
> MXO02228.3prime
ATGGTCTAGAAAGCTTGCCTCGGCGTAGAGCAGTCGTGAACGTGATTTCC
GGAGGCCGCGAGAGCCTCCACCGCCGATTCCACTGTCTCCGCCCTCGCCA
CATTGCCAGGACTTGGTCTTGGCCCGAAAATATCGAAACTCATCATTGTG
CGCCGGTGCCAGCATTGGTACATATTGGCTGGGCTGGCATAGCTGCGAGT
ATAGACCGAAGAACTCCTTGTACCCATTGTGCAGGATATAAAGTTCAGGA
TAGTCCAGTGCCGGATAGTTGTGGGTATGCTGACTTCTGTCGTTGCTCCG
CAGGTAGCGCAATAGCTTGGGACCCCGTTCCGAGGAGAACTCACAGTGGA
AGACGTAGATGCGTCGATTTTCCTGATTGGAGGTCAGCGTGGGAAACGCC
TCCTGTATCTGCCCACGTGTGTACAAATTCTTCGCTCCCCGTATGTGTCC
GCCAAGGAACTCGTATGGGTAACGGCAGTCTATGATCTCGTATCCGCCCT
GGCTTCCCAATTGTTCATCAAACTCGCCCTGAATCAGTCTGGCCAATGTG
TCACTGGAGATGGTCTTTAGATCACGATGTCTAATGCCTGTCGCCAAACA
GGGCAGGGTACATGGCTTGCTGAGATCTCCGATTAACTCTGGTTCATCTC
CCAGTGCTCTCATGATCTCGGCGTCGTTCATTGATAGAGTTTTCCGTTGC
ATCTTCTTCATGGGCATGTTGGTCTCCTGATCTGGTTCTTGAACCGCTTC
MXO02228.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:31:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4965-PA | 1281 | twe-RA | 547..1278 | 750..19 | 3660 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:19:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| twe-RD | 1916 | CG4965-RD | 834..1565 | 750..19 | 3660 | 100 | Minus |
| twe-RC | 2240 | CG4965-RC | 695..1426 | 750..19 | 3660 | 100 | Minus |
| twe-RB | 1803 | CG4965-RB | 721..1452 | 750..19 | 3660 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:18:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16260228..16260959 | 19..750 | 3660 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:19:00 has no hits.
MXO02228.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:33 Download gff for
MXO02228.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4965-PA | 547..1281 | 16..750 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:47:31 Download gff for
MXO02228.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| twe-RB | 721..1452 | 19..750 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:04:57 Download gff for
MXO02228.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| twe-RB | 721..1452 | 19..750 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:04:57 Download gff for
MXO02228.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16260228..16260959 | 19..750 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:47:31 Download gff for
MXO02228.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16260228..16260959 | 19..750 | 100 | | Plus |
MXO02228.5prime Sequence
865 bp (719 high quality bases) assembled on 2007-01-19
> MXO02228.5prime
GCGGCCGCGACGTCCACATATACCTGCCGTTCACTATTATTTAGTGAAAT
GAGATATTATGATATTTTCTGAATTGTGATTAAAAAGGCAACTTTATGCC
CATGCAACAGAAACTATAAAAAATACAGAGAATGAAAAGAAACAGATAGA
TTTTTTAGTTCTTTAGGCCCGTAGTCTGCAAATCCTTTTATGATTTTCTA
TCAAACAAAAGAGGAAAATAGACCAGTTGCAATCCAAACGAGAGTCTAAT
AGAATGAGGTCGAAAAGTAAATCGCGCGGGTTTGTTACTGATAAAGCAGG
CAAGACCTAAAATGTGTAAAGGGCAAAGTGTATACTTTGGCGTCACCCCT
TACATATTTTAGGTCTTTTTTTATTGTGCGTAACTAACTTGCCATCTTCA
AACAGGAGGGCTGGAAGAAGCAGACCGCTAACACAGTACATAAAAAAGGA
GACATGAACGATGAACATCAAAAAGTTTGCAAAACAAGCAACAGTATTAA
CCTTTACTACCGCACTGCTGGCAGGAGGCGCAACTCAAGCGTTTGCGAAA
GAAACGAACCAAAAGCCATATAAGGAAACATACGGCATTTCCCATATTAC
ACGCCATGATATGCTGCAAATCCCTGAACAGCAAAAAAATGAAAAATATA
AAGTTCCTGAGTTCGATTCGTCCACAATTAAAAATATCTCTTCTGCAAAA
GGCCTGGACGTTTGGGACAGCTGGCCATTACAAAACACTGACGGCACTGT
CGCAAACTATCACGGCTACCACATCGTCTTTGCATTAGCCGGAGATCCTA
AAAATGCGGATGACACATCGATTTACATGTTCTATCAAAAAATCGGCGAA
ACTTCTATTGACAGC
MXO02228.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-10 05:31:32 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 19:53:10 has no hits.
Blast to na_all.dmel.RELEASE6 performed on 2014-11-28 19:53:08 has no hits.
Blast to na_te.dros performed on 2014-11-28 19:53:09 has no hits.
MXO02228.5prime Sim4 Records
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:29:52 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:29:52 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 22:44:32 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 22:44:32 has no hits.
