MXO02230.3prime Sequence
851 bp (743 high quality bases) assembled on 2007-01-19
> MXO02230.3prime
ATGGTCTAGAAAGCTTGCGGAATTACTGAATTTCTCGTCGCTAGTCAGAA
CGTTGTATGCACAGCCGAGGGCCCAGGAGATTTCGTGGCCATCTATCTTC
TTGTAAAGCTTAATCTTCTTGCCATCGTTGAGGCCAAATCCTTCGCGCAG
CAGCGTCGAGATGAAGGTAAGGTCGAAGCACATGAAGGGCTGCTCATCGT
TGGGAATGGCACAGATCTCCTGGGCCTTCTTGCGATAAGCTTCCACCGTG
GTCTCGCCGCCAGCCAGTGGATCCACCAGACCCGACTCGATGGCCCGCTC
AAAGTAGTAGCTGAACGCGGCCACCGCGTGCTGCTTGAGTGTGAACGGCT
TGGGCTTGACCAGCGGCATTACCTTGCTCTTGACCAGCTCCAGGCAGGCA
TCGAAGTCCACAATGGGCTGCTCGGCACTGGACTTGCCATTCTCCTTGCC
GCTGACCTTGTACTGCACATTGCCGTATGTCCACGTGCGATTGGCGATTA
TGGGATTCACGCAGACGCTCTCCAGCACCGTATCCTCCTTCTTGTAGCCG
TGCGTGAAGACAGCATGGCGTGCAGCCATTAGACCCAGTCCCAGATAGCT
GTGCGTGAAGACGTTGATCTTCTTGCTGGACGTGACCACCTCGTGCATGT
ACTTATCGTACACGGGCACCTGGTCCGGATCCGTTGGCGAGAAGGTTACC
TGCGTGCTACCGCCGCCCAAGTCCAAGGCAGCTGCCTGGTTCGTCTTGGA
CAGGCGGGCCAGCAGGAAGTTCACGGTAAACCAGCTGAAGATGCCCTCGT
CCGTGCCGTCCATGATCTCCCCGGCATCCATATCCACACTAAACTCGGGA
C
MXO02230.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:31:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3059-PB | 1395 | NTPase-RB | 563..1392 | 848..19 | 4100 | 99.7 | Minus |
CG3059-PA | 1386 | NTPase-RA | 554..1383 | 848..19 | 4100 | 99.7 | Minus |
CG3059-PD | 816 | NTPase-RD | 1..813 | 831..19 | 4015 | 99.7 | Minus |
CG3059-PC | 816 | NTPase-RC | 1..813 | 831..19 | 4015 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:19:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
NTPase-RF | 2291 | CG3059-RF | 935..1764 | 848..19 | 4120 | 99.8 | Minus |
NTPase-RE | 2111 | CG3059-RE | 755..1584 | 848..19 | 4120 | 99.8 | Minus |
NTPase-RA | 2095 | CG3059-RA | 740..1569 | 848..19 | 4120 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:19:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2881382..2882121 | 109..848 | 3670 | 99.7 | Plus |
2L | 23513712 | 2L | 2881231..2881322 | 19..110 | 460 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:19:54 has no hits.
MXO02230.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:34 Download gff for
MXO02230.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3059-PA | 552..1386 | 15..851 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:52 Download gff for
MXO02230.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
NTPase-RA | 738..1579 | 8..851 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:05:24 Download gff for
MXO02230.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
NTPase-RA | 738..1579 | 8..851 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:05:24 Download gff for
MXO02230.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2881221..2881320 | 8..108 | 95 | <- | Plus |
2L | 2881382..2882123 | 109..851 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:52 Download gff for
MXO02230.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2881221..2881320 | 8..108 | 95 | <- | Plus |
arm_2L | 2881382..2882123 | 109..851 | 99 | | Plus |
MXO02230.5prime Sequence
698 bp (663 high quality bases) assembled on 2007-01-19
> MXO02230.5prime
CAGTCGACATGAAATACGAATATAAGCTGCTGGCCACGGATGAGAAGCCA
CCGCGGCGGAAAAGTAGCGGATCACCAAATGCCAGCAGTGGTGGAAACCG
CGGGCCCAGCGGCCTCAAGATCTCCTTCCTGTGCCTGATCATCTCCGTCA
TCCTCCTGCTCTTTGTCTTTGGCTTCGTCTCCGAGAACGCCAGTCCGTAT
CTGGCCCGTTTGGCCTCCAAGTTTGGCTACAGCAAGGTGCAGTATGCGGC
CATCATCGATGCCGGATCGACGGGCAGCCGTGTGCTGGCCTACAAGTTCA
ATCGCAGCTTCATCGACAACAAACTGGTGCTGTACGAGGAGCTGTTCAAG
GAGCGCAAGCCGGGTCTGAGCTCCTTCGCGGATAATCCCGCCGAGGGTGC
CCACTCCATCAAACTGCTGCTGGACGAGGCCCGCGCCTTCATACCCAAGG
AGCACTGGTCTTCCACACCGCTGGTTCTGAAAGCGACCGCCGGCCTGAGA
CTCCTGCCCGCCAGCAAGGCGGAAAACATTCTAAATGCCGTCCGAGATCT
CTTCGCCAAGTCCGAGTTTAGTGTGGATATGGATGCCGTGGAGATCATGG
ACGGCACGGACGAGGGCATCTTCAGCTGGTTTACCGTGAACTTCCTGCTG
GGCCGCCTGTCCAAGACGAACCACGCAGCTGCCTTGGACTTGGGCGGA
MXO02230.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:32:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3059-PA | 1386 | NTPase-RA | 1..689 | 9..697 | 3420 | 99.8 | Plus |
CG3059-PB | 1395 | NTPase-RB | 31..698 | 30..697 | 3315 | 99.8 | Plus |
CG3059-PD | 816 | NTPase-RD | 1..119 | 579..697 | 570 | 99.1 | Plus |
CG3059-PC | 816 | NTPase-RC | 1..119 | 579..697 | 570 | 99.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:33:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
NTPase-RA | 2095 | CG3059-RA | 186..875 | 8..697 | 3435 | 99.9 | Plus |
NTPase-RC | 2182 | CG3059-RC | 293..961 | 29..697 | 3330 | 99.9 | Plus |
NTPase-RD | 2107 | CG3059-RD | 218..886 | 29..697 | 3330 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:33:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2881986..2882512 | 697..171 | 2620 | 99.8 | Minus |
2L | 23513712 | 2L | 2882691..2882834 | 172..29 | 720 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:33:03 has no hits.
MXO02230.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:34 Download gff for
MXO02230.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3059-PA | 1..689 | 9..697 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:36:49 Download gff for
MXO02230.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
NTPase-RA | 186..875 | 8..697 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:26:04 Download gff for
MXO02230.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
NTPase-RA | 186..875 | 8..697 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:26:04 Download gff for
MXO02230.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2882920..2882941 | 8..29 | 100 | | Minus |
2L | 2881986..2882511 | 172..697 | 99 | <- | Minus |
2L | 2882692..2882833 | 30..171 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:36:49 Download gff for
MXO02230.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2881986..2882511 | 172..697 | 99 | <- | Minus |
arm_2L | 2882692..2882833 | 30..171 | 100 | <- | Minus |
arm_2L | 2882920..2882941 | 8..29 | 100 | | Minus |