MXO02231.3prime Sequence
764 bp (740 high quality bases) assembled on 2007-01-19
> MXO02231.3prime
ATGGTCTAGAAAGCTTGCAATTGTTTCAGTGCGAGGATCGATCTTGTGTA
TAGCCTGCATGAGGCTCTCGGTGTTCGCCGTGTTGATGCCCTGCTTGGAC
ATGTCAGTCAGTCGGTCGGTGATTGGCTTTTGGTCCTGGCCGCGCTGCCA
CCACAGATGGGCGCAGGTGTGAAGCAGGGGAATGTAGAGCGGCAGCAGAT
CAATATCGCACAACGTCTCGAAGCGACTCAGTGCCAGCAGGGCCCACCTC
TCGGCCGCGTGATGAGGCACTGGGGATGAGGTGCAGGCAGCCACTAGACG
GCAGAGTATCAAAAGCACCGGCCTCGATCGATTCATGTATATCTTGTTCA
GCAAGCGGAAACAGTTCTCCAGAATAGGTATGGCCATTTCGTTACGCCGC
TCATCCAGAAACTGGCACGCCCTGGTCAGTTCGTCGTGCTGCAGGAAGCG
CAGGAAGTACTCCGAGTCCCGGAGCATCGCCTGGCTTGCCACATACGTGA
GGAATGCCTCGAAGGCTGCACTCCGTTCGCCGATCAGCTCGGACTTGAAG
TTACCCATCAGGACCTTGGCTGGGAAGTACTTGTTGGCCATCTCCGCCGG
ATGCTGCCGCTTAAGGCCCAGATAAAGCTCCCGAAAGTCGGTGTATCGGC
GCTCAATCTTTGCCGGCTGAGTGTCCTCCGTGGCTCCATCCTGCTTAACA
GTGAGCTCATAGACCACGAACCGCTTGATCTTCACATCCTCGCCTCGGGC
GGCATATGTGGCAG
MXO02231.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:32:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3077-PA | 981 | CG3077-RA | 241..978 | 755..19 | 3650 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3077-RB | 2025 | CG3077-RB | 388..1132 | 761..19 | 3675 | 99.7 | Minus |
CG3077-RA | 1372 | CG3077-RA | 397..1141 | 761..19 | 3675 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2764502..2765109 | 149..755 | 2990 | 99.8 | Plus |
2L | 23513712 | 2L | 2764309..2764442 | 19..152 | 670 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 20:30:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3S18 | 6126 | 3S18 DM23420 6126bp Derived from U23420 (g733531) (Rel. 48, Last updated, Version 3). | 1181..1239 | 735..678 | 112 | 67.8 | Minus |
MXO02231.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:35 Download gff for
MXO02231.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3077-PA | 229..981 | 16..764 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:35:42 Download gff for
MXO02231.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3077-RA | 392..1145 | 15..764 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:44 Download gff for
MXO02231.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3077-RA | 392..1145 | 15..764 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:44 Download gff for
MXO02231.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2764305..2764441 | 15..151 | 98 | <- | Plus |
2L | 2764505..2765117 | 152..764 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:35:42 Download gff for
MXO02231.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2764305..2764441 | 15..151 | 98 | <- | Plus |
arm_2L | 2764505..2765117 | 152..764 | 99 | | Plus |
MXO02231.5prime Sequence
851 bp (810 high quality bases) assembled on 2007-01-19
> MXO02231.5prime
CAGTCGACATGCCCATTCACGCCGTGATGGCCAAGCGCCTGCACCACCAG
CCTACCTTCGATGGGGATCCACCCGGTCCGGATGAGCTGGACAGTCCAGC
CATCGAGGCGGCGGCCCTCGACATTCCCCCTCCCGAATCCGATAAGGCGC
TCCAAAAAGGTGTCTGGGAGCGAGCCACAAGTGCTGAGTATAAGCCGACC
ACGGATGGGAGCACCGTGCTCCGCTTTGACATCTTGCTGGCCCACATAAT
GCCGCCCGATGGCGAGGATGTGAAGATCAAGCGGTTCGTGGTCTATGAGC
TCACTGTTAAGCAGGATGGAGCCACGGAGGACACTCAGCCGGCAAAGATT
GAGCGCCGATACACCGACTTTCGGGAGCTTTATCTGGGCCTTAAGCGGCA
GCATCCGGCGGAGATGGCCAACAAGTACTTCCCAGCCAAGGTCCTGATGG
GTAACTTCAAGTCCGAGCTGATCGGCGAACGGAGTGCAGCCTTCGAGGCA
TTCCTCACGTATGTGGCAAGCCAGGCGATGCTCCGGGACTCGGAGTACTT
CCTGCGCTTCCTGCAGCACGACGAACTGACCAGGGCGTGCCAGTTTCTGG
ATGAGCGGCGTAACGAAATGGCCATACCTATTCTGGAGAACTGTTTCCGC
TTGCTGAACAAGATATACATGAATCGATCGAGGCCGGTGCTTTTGATACT
CTGCCGTCTAGTGGCTGCCTGCACCTCATCCCCAGTGCCTCATCACGCGG
CCGAGAGGTGGGCCCTGCTGGCACTGAGTCGCTTCGAGACGTTGTGCGAT
ATTGATCTGCTGCCGCTCTACATTCCCCTGCTTCACACCTGCGCCCATCT
G
MXO02231.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:32:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3077-PA | 981 | CG3077-RA | 1..843 | 9..851 | 4215 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3077-RA | 1372 | CG3077-RA | 164..1006 | 9..851 | 4215 | 100 | Plus |
CG3077-RB | 2025 | CG3077-RB | 162..997 | 16..851 | 4180 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2764507..2765200 | 851..158 | 3470 | 100 | Minus |
2L | 23513712 | 2L | 2765282..2765427 | 161..16 | 730 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 20:05:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3S18 | 6126 | 3S18 DM23420 6126bp Derived from U23420 (g733531) (Rel. 48, Last updated, Version 3). | 1158..1239 | 245..327 | 115 | 63.1 | Plus |
MXO02231.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:35 Download gff for
MXO02231.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3077-PA | 1..843 | 9..851 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:23:37 Download gff for
MXO02231.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3077-RA | 161..1006 | 5..851 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:50:49 Download gff for
MXO02231.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3077-RA | 161..1006 | 5..851 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:50:49 Download gff for
MXO02231.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2764507..2765198 | 160..851 | 100 | <- | Minus |
2L | 2765284..2765432 | 12..159 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:23:37 Download gff for
MXO02231.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2764507..2765198 | 160..851 | 100 | <- | Minus |
arm_2L | 2765284..2765432 | 12..159 | 99 | | Minus |