MXO02232.3prime Sequence
823 bp (751 high quality bases) assembled on 2007-01-19
> MXO02232.3prime
ATGGTCTAGAAAGCTTGCTATTTTCTGAAACTTCGCAATAAAAAAGCCCA
CAGTGTCCGCATTTGCTCCGCTTGGACCGAAGCGCTGCAACAGACGAGAT
TTACATGCCTCGAAACCGGGAAGCGGAAGTCCGGGACCGCCCCACCGGGG
AGTGGCATCTGTTAGCCGCAGCTCGACAAATTTTCTTAGTGCCCAGGCCA
CAAGACATTCGCACTCATCCTCGGTGACGGTGCACGTGCTATATACAAGG
ATGCCGCCAGGACGAACGAGCTGCACTGCCTGTTCAAATAGCCGGCGCTG
AATATGGGGATATGAGGACAAGACCTTAACCTGTTTAATGCTGCAGGACA
ACTGTGGCCGGTTGCCCAGCCCACTGCAGGGTGCATCGAGCAAGATTCGG
TCAAAGCTTTCACATGGAAACGGAGGCCCAGTGAATTCTCCCACGGGTGC
AGATGGAGCGTCCGCTGCCACTGCCTCGGTGGAGTTAAAAACATGCGCCG
TTATGCTTTTGTAGTGTCCCAATTTGGGCAGCATGCTGCGGACGCGACTG
GCCGAATTGTCTAGGGCCACCACAGATCCCCGATCGCCCATCAACTCGGC
TATGTGGCTTGTTTTGTTACCCGGAGCGGCACACATGTCCAGTATGCGCT
CGCCGGGCTGCGGATCCAGGACACGGACGCAAACAATAGAAGGCAGGTTT
TGCAACAGGCCGTCTTCGCTGCTTAGATCCCCCAGCGTGGGCACTCCGCT
GACGGTGGACTGCATTTCCCGGCCACTCGAGAGGCGGGCTTCTCCGCGTT
GTTGAACAGCTGATACCGCTGCA
MXO02232.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:32:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11109-PB | 1320 | CG11109-RB | 512..1317 | 823..19 | 3940 | 99.6 | Minus |
| CG11109-PA | 1077 | CG11109-RA | 269..1074 | 823..19 | 3940 | 99.6 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:34:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11109-RA | 1445 | CG11109-RA | 623..1428 | 823..19 | 3975 | 99.6 | Minus |
| CG11109-RB | 1415 | CG11109-RB | 593..1398 | 823..19 | 3975 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:33:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22872880..22873685 | 823..19 | 3950 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:34:00 has no hits.
MXO02232.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:35 Download gff for
MXO02232.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11109-PA | 270..1077 | 15..822 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:28:50 Download gff for
MXO02232.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11109-RB | 594..1401 | 15..822 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:17:18 Download gff for
MXO02232.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11109-RB | 594..1401 | 15..822 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:17:18 Download gff for
MXO02232.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22872881..22873688 | 15..822 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:28:50 Download gff for
MXO02232.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22865981..22866788 | 15..822 | 99 | | Minus |
MXO02232.5prime Sequence
800 bp (761 high quality bases) assembled on 2007-01-19
> MXO02232.5prime
CAGTCGACATGTTGTGCATTGATCCGCTGGACTCACAGCTCACCAAAGCT
GTGGCCGACTCCGAGCTCAAGGAGGTAGTGGTTGACACTAACTGCGGAGC
TGCACTACTGCGAGGCGCCCACATATACGCCCCCGGTGTTTTAGCTATGG
AGTCAAACACTGAGCGGGAGGAACTCGTCAATGTCTACGCAGATCTGGAT
GGAAAATGCAAGCGCGGGACGGTCAAGCGGTACGAAAGCCCAAATAAGGT
TTTCCTGGGTACAGGCAAGGTGTTAATGCAGCGGTATCAGCTGTTCAACA
ACGCGGAGAAGCCCGCCTCTGGAGTGGCCGTGGAAATGCAGTCCAACGTC
AGCGGAGTGCCCACGCTGGGGGATCTAAGCAGCGAAGACGGCCTGTTGCA
AAACCTGCCTTCTATTGTTTGCGTCCGTGTCCTGGATCCGCAGCCCGGCG
AGCGCATACTGGACATGTGTGCCGCTCCGGGTAACAAAACAAGCCACATA
GCCGAGTTGATGGGCGATCGGGGATCTGTGGTGGCCCTAGACAATTCGGC
CAGTCGCGTCCGCAGCATGCTGCCCAAATTGGGACACTACAAAAGCATAA
CGGCGCATGTTTTTAACTCCACCGAGGCAGTGGCAGCGGACGCTCCATCT
GCACCCGTGGGAGAATTCACTGGGCCTCCGTTTCCATGTGAAAGCTTTGA
CCGAATCTTGCTCGATGCACCCTGCAGTGGGCTGGGCAACCGGCCACAGT
TGTCCTGCAGCATTAAACAGGTTAAGGTCTTGTCCTCATATCCCTATCAC
MXO02232.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:32:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11109-PB | 1320 | CG11109-RB | 244..1029 | 9..794 | 3930 | 100 | Plus |
| CG11109-PA | 1077 | CG11109-RA | 1..786 | 9..794 | 3930 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:45:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11109-RA | 1445 | CG11109-RA | 351..1140 | 5..794 | 3935 | 99.9 | Plus |
| CG11109-RB | 1415 | CG11109-RB | 321..1110 | 5..794 | 3935 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:45:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22872608..22873397 | 5..794 | 3935 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:45:55 has no hits.
MXO02232.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:36 Download gff for
MXO02232.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11109-PA | 1..790 | 9..800 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:15 Download gff for
MXO02232.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11109-RB | 316..1114 | 1..800 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:35:56 Download gff for
MXO02232.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11109-RB | 316..1114 | 1..800 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:35:56 Download gff for
MXO02232.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22872603..22873401 | 1..800 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:15 Download gff for
MXO02232.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22865703..22866501 | 1..800 | 99 | | Plus |
