MXO02234.3prime Sequence
758 bp (724 high quality bases) assembled on 2007-01-19
> MXO02234.3prime
ATGGTCTAGAAAGCTTGCCTTGTGGTAACCATGGTGGTCGGAGTAGACGG
TGGCATCGTGGCCAATGGCGCTAACAGGGTAGCTGCTGACGGCAACGGTG
GGTGCGTGCTTGACCACGGAGTGGGACACCACGGGCACCTTCACGTAGAC
GGGGTAGGGACGATCCACATGCACGGGCACCTGGACATTGACGGCCTTCT
CCACGTAGACAGGGTAGGGCTTGGCCACTGGCACGGGGTAGGGCCTGGGC
ACCTCAACGGGCACTGGGCGATCGACGGGCACATGGACGGGCACCTTCTC
GTGACGGATCACTTCGTAGGGCTGGGGCACTGGCACGGGCACCTTGACGT
ACTCCTTAACGGTCACGGGCACCTTGCGGATGACTTCGTAGGGCTGGGGC
ACGGGCTCCTTAACTTCGACGGGCACGCGCTTCTCATGGACGACGGGATA
GGGGCGGTCCACATGCACGGGCACTGGGATTCCCTTGGTGATGGTGATGG
TCTTGTGCACATCGGCCTGCTTGCTGATCACATAGGGGGCGGGAGCGTGG
TGGACAGCGACGGCGGGAGCAGTGTGTCCAACGGCGATCGCGGGACCACT
GTGGCCCACGGCGACGGCAGCGGGTGCGGAGTATCCGGTCAGTCCGTAGC
CATGTCCGTAGCTTCCGTGGCCGGAGATGGAACCATGTCCCAGGTAGCCG
GTGTCCAGACCAGCATGACCGTAGCCGTAGCCCAGATCGAGCAGGCCGCG
CTTGTCCA
MXO02234.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:33:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16884-PA | 834 | CG16884-RA | 92..831 | 758..19 | 3675 | 99.8 | Minus |
| CG30101-PA | 987 | CG30101-RA | 472..498 | 333..307 | 135 | 100 | Minus |
| CG30101-PA | 987 | CG30101-RA | 409..440 | 414..383 | 135 | 96.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:45:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16884-RA | 1413 | CG16884-RA | 198..937 | 758..19 | 3685 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:45:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13945232..13945971 | 19..758 | 3685 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:45:58 has no hits.
MXO02234.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:37 Download gff for
MXO02234.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16884-PA | 93..834 | 15..757 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:18 Download gff for
MXO02234.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16884-RA | 199..942 | 13..757 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:35:57 Download gff for
MXO02234.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16884-RA | 199..942 | 13..757 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:35:57 Download gff for
MXO02234.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13945227..13945970 | 13..757 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:18 Download gff for
MXO02234.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13945227..13945970 | 13..757 | 99 | | Plus |
MXO02234.5prime Sequence
609 bp (549 high quality bases) assembled on 2007-01-19
> MXO02234.5prime
GCGGCCGCGACGTCCACATATACCTGCCGTTCACTATTATTTAGTGAAAT
GAGATATTATGATATTTTCTGAATTGTGATTAAAAAGGCAACTTTATGCC
CATGCAACAGAAACTATAAAAAATACAGAGAATGAAAAGAAACAGATAGA
TTTTTTAGTTCTTTAGGCCCGTAGTCTGCAAATCCTTTTATGATTTTCTA
TCAAACAAAAGAGGAAAATAGACCAGTTGCAATCCAAACGAGAGTCTAAT
AGAATGAGGTCGAAAAGTAAATCGCGCGGGTTTGTTACTGATAAAGCAGG
CAAGACCTAAAATGTGTAAAGGGCAAAGTGTATACTTTGGCGTCACCCCT
TACATATTTTAGGTCTTTTTTTATTGTGCGTAACTAACTTGCCATCTTCA
AACAGGAGGGCTGGAAGAAGCAGACCGCTAACACAGTACATAAAAAAGGA
GACATGAACGATGAACATCAAAAAGTTTGCAAAACAAGCAACAGTATTAA
CCTTTACTACCGCACTGCTGGCAGGAGGCGCAACTCAAGCGTTTGCGAAA
GACACGAACCAAAAGCCATATAAAGGAACATACGGCATTTCCCATATTAC
ACGCCATGA
MXO02234.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-10 05:33:10 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 22:19:58 has no hits.
Blast to na_all.dmel.RELEASE6 performed on 2014-11-28 22:19:57 has no hits.
Blast to na_te.dros performed on 2014-11-28 22:19:57 has no hits.
MXO02234.5prime Sim4 Records
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 23:05:26 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 23:05:26 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 00:42:54 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 00:42:54 has no hits.
