Clone Sequence Records
MXO02240.3prime Sequence
369 bp (369 high quality bases) assembled on 2007-01-19
> MXO02240.3prime
ATGGTCTAGAAAGCTTGCCGCGAAGATCTGGCCAACGCCACTCTGGTCAC
CATAACGAATAATATCGGCTCCATAGCAAGGATGTGCGCGCTGAATGAGA
AGATCGATAGGGTAAGTATCAATTTTCGTTACATACATATCCTCGTAGAC
TGAGCAACAAACCCATTTCAGGTCGTCTTTGTGGGCAACTTTCTGCGAGT
TAACCCCATTTCCATGAAGCTGCTGGCGTACGCAATGGAGTTCTGGTCCA
ATGGCACAATGAAGGGTCTTTTCCTGGAGCACGAGGGATACTTTGGGGCT
CTGGGTTGCCTGCTGCAGTTCAACGGCGAGCTGGCAGCCGCCCTTAACGA
CGGAGTGGAGCATGTCGAC
MXO02240.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:34:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5725-PD | 1206 | fbl-RD | 909..1101 | 171..363 | 965 | 100 | Plus |
| CG5725-PB | 1254 | fbl-RB | 957..1149 | 171..363 | 965 | 100 | Plus |
| CG5725-PA | 1260 | fbl-RA | 963..1155 | 171..363 | 965 | 100 | Plus |
| CG5725-PC | 1206 | fbl-RC | 909..1101 | 171..363 | 965 | 100 | Plus |
| CG5725-PE | 1539 | fbl-RE | 1242..1434 | 171..363 | 965 | 100 | Plus |
| CG5725-PD | 1206 | fbl-RD | 817..911 | 19..113 | 475 | 100 | Plus |
| CG5725-PB | 1254 | fbl-RB | 865..959 | 19..113 | 475 | 100 | Plus |
| CG5725-PA | 1260 | fbl-RA | 871..965 | 19..113 | 475 | 100 | Plus |
| CG5725-PC | 1206 | fbl-RC | 817..911 | 19..113 | 475 | 100 | Plus |
| CG5725-PE | 1539 | fbl-RE | 1150..1244 | 19..113 | 475 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:34:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fbl-RG | 2352 | CG5725-RG | 1324..1516 | 171..363 | 965 | 100 | Plus |
| fbl-RF | 1370 | CG5725-RF | 801..993 | 171..363 | 965 | 100 | Plus |
| fbl-RE | 2386 | CG5725-RE | 1358..1550 | 171..363 | 965 | 100 | Plus |
| fbl-RG | 2352 | CG5725-RG | 1232..1326 | 19..113 | 475 | 100 | Plus |
| fbl-RF | 1370 | CG5725-RF | 709..803 | 19..113 | 475 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:34:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20390733..20391077 | 19..363 | 1725 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:34:11 has no hits.
MXO02240.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:40 Download gff for
MXO02240.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5725-PB | 865..956 | 19..110 | 100 | == | Plus |
| CG5725-PB | 957..1152 | 171..369 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:28:59 Download gff for
MXO02240.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbl-RE | 1266..1357 | 19..110 | 100 | == | Plus |
| fbl-RE | 1358..1553 | 171..369 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:17:23 Download gff for
MXO02240.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbl-RE | 1266..1357 | 19..110 | 100 | == | Plus |
| fbl-RE | 1358..1553 | 171..369 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:17:23 Download gff for
MXO02240.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20390733..20391080 | 19..369 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:28:59 Download gff for
MXO02240.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20383833..20384180 | 19..369 | 99 | | Plus |
MXO02240.5prime Sequence
369 bp (369 high quality bases) assembled on 2007-01-19
> MXO02240.5prime
CAGTCGACATGCTCCACTCCGTCGTTAAGGGCGGCTGCCAGCTCGCCGTT
GAACTGCAGCAGGCAACCCAGAGCCCCAAAGTATCCCTCGTGCTCCAGGA
AAAGACCCTTCATTGTGCCATTGGACCAGAACTCCATTGCGTACGCCAGC
AGCTTCATGGAAATGGGGTTAACTCGCAGAAAGTTGCCCACAAAGACGAC
CTGAAATGGGTTTGTTGCTCAGTCTACGAGGATATGTATGTAACGAAAAT
TGATACTTACCCTATCGATCTTCTCATTCAGCGCGCACATCCTTGCTATG
GAGCCGATATTATTCGTTATGGTGACCAGAGTGGCGTTGGCCAGATCTTC
GCGGCAAGCTTTCTAGACC
MXO02240.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:34:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5725-PD | 1206 | fbl-RD | 909..1101 | 201..9 | 965 | 100 | Minus |
| CG5725-PB | 1254 | fbl-RB | 957..1149 | 201..9 | 965 | 100 | Minus |
| CG5725-PA | 1260 | fbl-RA | 963..1155 | 201..9 | 965 | 100 | Minus |
| CG5725-PC | 1206 | fbl-RC | 909..1101 | 201..9 | 965 | 100 | Minus |
| CG5725-PE | 1539 | fbl-RE | 1242..1434 | 201..9 | 965 | 100 | Minus |
| CG5725-PD | 1206 | fbl-RD | 817..911 | 353..259 | 475 | 100 | Minus |
| CG5725-PB | 1254 | fbl-RB | 865..959 | 353..259 | 475 | 100 | Minus |
| CG5725-PA | 1260 | fbl-RA | 871..965 | 353..259 | 475 | 100 | Minus |
| CG5725-PC | 1206 | fbl-RC | 817..911 | 353..259 | 475 | 100 | Minus |
| CG5725-PE | 1539 | fbl-RE | 1150..1244 | 353..259 | 475 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:50:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fbl-RG | 2352 | CG5725-RG | 1324..1516 | 201..9 | 965 | 100 | Minus |
| fbl-RF | 1370 | CG5725-RF | 801..993 | 201..9 | 965 | 100 | Minus |
| fbl-RE | 2386 | CG5725-RE | 1358..1550 | 201..9 | 965 | 100 | Minus |
| fbl-RG | 2352 | CG5725-RG | 1232..1326 | 353..259 | 475 | 100 | Minus |
| fbl-RF | 1370 | CG5725-RF | 709..803 | 353..259 | 475 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:50:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20390733..20391077 | 353..9 | 1725 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:50:31 has no hits.
MXO02240.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:40 Download gff for
MXO02240.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5725-PB | 957..1154 | 1..201 | 98 | | Minus |
| CG5725-PB | 865..956 | 262..353 | 100 | == | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:56 Download gff for
MXO02240.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbl-RE | 1266..1357 | 262..353 | 100 | == | Minus |
| fbl-RE | 1358..1555 | 1..201 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:34:44 Download gff for
MXO02240.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbl-RE | 1266..1357 | 262..353 | 100 | == | Minus |
| fbl-RE | 1358..1555 | 1..201 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:34:44 Download gff for
MXO02240.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20390733..20391082 | 1..353 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:56 Download gff for
MXO02240.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20383833..20384182 | 1..353 | 98 | | Minus |
