MXO02247.3prime Sequence
879 bp (844 high quality bases) assembled on 2007-01-19
> MXO02247.3prime
ATGGTCTAGAAAGCTTGCGTACAGTCCACAGCCGCGCAGGTTGTTTGCTA
TGATGACATCGGTGACAGCATCGAATACAAACTGAATGTTATTGGTATCT
GTGGCACACGTCATGTGGCAGTAGATTTCTTTTGAGGTTGATTTGTTTTT
CGCTTCAAATTGAGCCTGAATGTAAGCAGCCGCCTCGCCGTACTCCTGTC
CACCTGTGTATTCGGGGAAGCAAATCGTCAGGGGACTCTTGCGAATCTTC
TCCTCGAACAAATCCTTCTTGTTCAGGAATAGAATAATCGAGGTGTCCGT
GAACCATTTGTTGTTACAGATCGAGTCAAACAGTTTCAGCGACTCTTGCA
TGCGGTTCGTGGTTTCATCCTCATGCAAGACTTGATCGTACTCGGACATG
GCCACGCAGAAAATGATCGCCGTGACATCTTCGAAGCAGTGTATCCATTT
CTTACGTTCCGAGCGCTGACCGCCCACGTCAAACAATTTAAAGTTGAGGT
TTTTGAAGGAGAAGTGTACCTCAACGATGCCAGTGGTCTTGACGCGAGTG
CGCAAGATATCTTGTTCAGTTGGCTGGTAATCCTTGGCGCCTAACCGATC
CAAATCGTCCAGGAAATATTTTGCGGAATCGTTTAGTTGGTATTCGTTGC
TGCGCGAGAAGCACTCCTGGACACCGGCGTCCTGCCAGAGGCGTTTCATG
GCGGCCAGCAGCTCCTCCGAGAAGGGCTCGGTGTCGTGCATGCGTTGGCA
TACGTCGAACACCATCTTGGCATCGCTCTCCCGCTCGTTATTGCTGTACT
GAATACTTAAGGTTGGCATCGCGCGCAATATTGCAACTAATGATTGTATT
GTGTTGCTGTAGACAACCGGTCGATATTG
MXO02247.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:36:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2204-PB | 1065 | G-oalpha47A-RB | 202..1062 | 879..19 | 4255 | 99.7 | Minus |
| CG2204-PC | 1065 | G-oalpha47A-RC | 202..1062 | 879..19 | 4255 | 99.7 | Minus |
| CG2204-PA | 1065 | G-oalpha47A-RA | 202..1062 | 879..19 | 4255 | 99.7 | Minus |
| CG2204-PD | 1065 | G-oalpha47A-RD | 202..1062 | 879..19 | 4255 | 99.7 | Minus |
| CG2204-PE | 1065 | G-oalpha47A-RE | 202..1062 | 879..19 | 4255 | 99.7 | Minus |
| CG2204-PF | 1065 | G-oalpha47A-RF | 202..1062 | 879..19 | 4255 | 99.7 | Minus |
| CG2204-PG | 1065 | G-oalpha47A-RG | 202..1062 | 879..19 | 4255 | 99.7 | Minus |
| CG2204-PH | 1065 | G-oalpha47A-RH | 202..1062 | 879..19 | 4255 | 99.7 | Minus |
| CG2204-PI | 1065 | G-oalpha47A-RI | 202..1062 | 879..19 | 4255 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:34:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Galphao-RI | 5457 | CG2204-RI | 593..1453 | 879..19 | 4275 | 99.8 | Minus |
| Galphao-RH | 2194 | CG2204-RH | 345..1205 | 879..19 | 4275 | 99.8 | Minus |
| Galphao-RG | 2322 | CG2204-RG | 473..1333 | 879..19 | 4275 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:34:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10461510..10461697 | 206..19 | 940 | 100 | Minus |
| 2R | 25286936 | 2R | 10448470..10448632 | 779..617 | 815 | 100 | Minus |
| 2R | 25286936 | 2R | 10461289..10461446 | 358..201 | 790 | 100 | Minus |
| 2R | 25286936 | 2R | 10461096..10461225 | 487..358 | 650 | 100 | Minus |
| 2R | 25286936 | 2R | 10460903..10461031 | 616..488 | 645 | 100 | Minus |
| 2R | 25286936 | 2R | 10448282..10448383 | 879..778 | 480 | 98 | Minus |
| 3L | 28110227 | 3L | 6973588..6973731 | 202..345 | 225 | 77.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:34:17 has no hits.
MXO02247.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:46 Download gff for
MXO02247.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2204-PI | 202..1065 | 15..879 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:29:03 Download gff for
MXO02247.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Galphao-RG | 473..1337 | 14..879 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:17:26 Download gff for
MXO02247.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Galphao-RG | 473..1337 | 14..879 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:17:26 Download gff for
MXO02247.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10448282..10448383 | 778..879 | 98 | -> | Minus |
| 2R | 10448472..10448632 | 617..777 | 100 | -> | Minus |
| 2R | 10460903..10461031 | 488..616 | 100 | -> | Minus |
| 2R | 10461096..10461225 | 358..487 | 100 | -> | Minus |
| 2R | 10461290..10461443 | 204..357 | 100 | -> | Minus |
| 2R | 10461513..10461701 | 14..203 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:29:03 Download gff for
MXO02247.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6335787..6335888 | 778..879 | 98 | -> | Minus |
| arm_2R | 6335977..6336137 | 617..777 | 100 | -> | Minus |
| arm_2R | 6348408..6348536 | 488..616 | 100 | -> | Minus |
| arm_2R | 6348601..6348730 | 358..487 | 100 | -> | Minus |
| arm_2R | 6348795..6348948 | 204..357 | 100 | -> | Minus |
| arm_2R | 6349018..6349206 | 14..203 | 98 | | Minus |
MXO02247.5prime Sequence
816 bp (720 high quality bases) assembled on 2007-01-19
> MXO02247.5prime
CAGTCGACATGGGCTGCGCACAGTCTGCCGAGGAGCGAGCCGCAGCCGCC
AGGAGTCGCCTCATCGAGCGCAATCTCAAGGAGGACGGCATACAGGCGGC
AAAGGACATCAAACTCCTGCTGCTGGGTGCCGGTGAGTCGGGCAAGAGCA
CAATAGTCAAACAGATGAAAATCATTCACGAGAGCGGCTTCACTGCTGAG
GACTTTAAACAATATCGACCGGTTGTCTACAGCAACACAATACAATCATT
AGTTGCAATATTGCGCGCGATGCCAACCCTAAGTATTCAGTACAGCAATA
ACGAGCGGGAGAGCGATGCCAAGATGGTGTTCGACGTATGCCAACGCATG
CACGACACCGAGCCCTTCTCGGAGGAGCTGCTGGCCGCCATGAAACGCCT
CTGGCAGGACGCCGGTGTCCAGGAGTGCTTCTCGCGCAGCAACGAATACC
AACTAAACGATTCCGCAAAATATTTCCTGGACGATTTGGATCGGTTAGGC
GCCAAGGATTACCAGCCAACTGAACAAGATATCTTGCGCACTCGCGTCAA
GACCACTGGCATCGTTGAGGTACACTTCTCCTTCAAAAACCTCAACTTTA
AATTGTTTGACGTGGGCGGTCAGCGCTCGGAACGTAAGAAATGGATACAC
TGCTTCGAAGATGTCACGGCGATCATTTTCTGCGTGGCCATGTCCGAGTA
CGATCAAGTCTTGCATGAGGATGAAACCACGAACCGCATGCAAGAGTCGC
TGAAACTGTTTGACTCGATCTGTAACAACAAATGGTTCACGGACACCTCG
ATTATTCTATTCCTGA
MXO02247.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:36:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2204-PC | 1065 | G-oalpha47A-RC | 1..808 | 9..816 | 3990 | 99.7 | Plus |
| CG2204-PA | 1065 | G-oalpha47A-RA | 1..808 | 9..816 | 3990 | 99.7 | Plus |
| CG2204-PI | 1065 | G-oalpha47A-RI | 1..808 | 9..816 | 3990 | 99.7 | Plus |
| CG2204-PB | 1065 | G-oalpha47A-RB | 64..808 | 72..816 | 3525 | 98.9 | Plus |
| CG2204-PD | 1065 | G-oalpha47A-RD | 64..808 | 72..816 | 3525 | 98.9 | Plus |
| CG2204-PE | 1065 | G-oalpha47A-RE | 64..808 | 72..816 | 3525 | 98.9 | Plus |
| CG2204-PF | 1065 | G-oalpha47A-RF | 64..808 | 72..816 | 3525 | 98.9 | Plus |
| CG2204-PG | 1065 | G-oalpha47A-RG | 64..808 | 72..816 | 3525 | 98.9 | Plus |
| CG2204-PH | 1065 | G-oalpha47A-RH | 64..808 | 72..816 | 3525 | 98.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:46:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Galphao-RI | 5457 | CG2204-RI | 391..1199 | 8..816 | 4015 | 99.8 | Plus |
| Galphao-RA | 3462 | CG2204-RA | 379..1187 | 8..816 | 4015 | 99.8 | Plus |
| Galphao-RC | 2367 | CG2204-RC | 316..1124 | 8..816 | 4015 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:46:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10448198..10448383 | 126..311 | 900 | 98.9 | Plus |
| 2R | 25286936 | 2R | 10448470..10448632 | 310..472 | 815 | 100 | Plus |
| 2R | 25286936 | 2R | 10461096..10461225 | 602..731 | 650 | 100 | Plus |
| 2R | 25286936 | 2R | 10460903..10461031 | 473..601 | 645 | 100 | Plus |
| 2R | 25286936 | 2R | 10445506..10445627 | 8..129 | 610 | 100 | Plus |
| 2R | 25286936 | 2R | 10461289..10461374 | 731..816 | 430 | 100 | Plus |
| 2R | 25286936 | 2R | 10439577..10439633 | 72..128 | 195 | 89.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:46:01 has no hits.
MXO02247.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:46 Download gff for
MXO02247.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2204-PI | 1..807 | 9..815 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:20 Download gff for
MXO02247.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Galphao-RC | 306..1123 | 1..815 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:00 Download gff for
MXO02247.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Galphao-RC | 306..1123 | 1..815 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:00 Download gff for
MXO02247.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10445496..10445624 | 1..126 | 96 | -> | Plus |
| 2R | 10448199..10448383 | 127..311 | 98 | -> | Plus |
| 2R | 10448472..10448632 | 312..472 | 100 | -> | Plus |
| 2R | 10460903..10461031 | 473..601 | 100 | -> | Plus |
| 2R | 10461096..10461225 | 602..731 | 100 | -> | Plus |
| 2R | 10461290..10461373 | 732..815 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:20 Download gff for
MXO02247.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6333001..6333129 | 1..126 | 96 | -> | Plus |
| arm_2R | 6335704..6335888 | 127..311 | 98 | -> | Plus |
| arm_2R | 6335977..6336137 | 312..472 | 100 | -> | Plus |
| arm_2R | 6348408..6348536 | 473..601 | 100 | -> | Plus |
| arm_2R | 6348601..6348730 | 602..731 | 100 | -> | Plus |
| arm_2R | 6348795..6348878 | 732..815 | 100 | | Plus |
