MXO02255.3prime Sequence
387 bp (312 high quality bases) assembled on 2007-01-19
> MXO02255.3prime
ATGGTCTAGAAAGCTTGCGGGCAGATTGCAGCCCACCTGGGTGACGACCT
TGGCGGCTACGCTGGAGGCCATTCGGATGCACTCGCCCAGCGAGCGCTTC
TCCAGCCAGGCGTGCAAGAATCCGGCCACAAAAGCATCTCCGGCCCCAGT
GGCATCCACCAGCTGCTCTACGCGCTGCGCCCTGAAGTCCTCAAAGCTTA
CGGGTCCGGGAGGAGCCAGCTCCTCCACGTAGTTGGTGATCACCTGGACG
CCGGCACTGCCGTTGGTGACGAAGATGACCTTGGTGCCACCGGATTGCAG
GAGATGATCCGCCAGTTCGTCGACGTTTCGGAACCCACCCGCAGCCTCGG
CCAGCGCCTCGAACTCCTGTCGGTTTCCGAACACGCC
MXO02255.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:37:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1851-PA | 1101 | Ady43A-RA | 734..1098 | 383..19 | 1825 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:19:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ady43A-RA | 2203 | CG1851-RA | 1209..1573 | 383..19 | 1825 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:19:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7243654..7244018 | 19..383 | 1825 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:19:26 has no hits.
MXO02255.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:50 Download gff for
MXO02255.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1851-PA | 730..1101 | 18..387 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:47:36 Download gff for
MXO02255.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ady43A-RA | 1205..1573 | 19..387 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:05:08 Download gff for
MXO02255.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ady43A-RA | 1205..1573 | 19..387 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:05:08 Download gff for
MXO02255.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7243654..7244019 | 19..387 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:47:36 Download gff for
MXO02255.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3131159..3131524 | 19..387 | 99 | | Plus |
MXO02255.5prime Sequence
585 bp (535 high quality bases) assembled on 2007-01-19
> MXO02255.5prime
CAGTCGACATGGAGTACCTGAGCTACGTGTACGAAAAAATCTTCGGGGGC
AATCCTCCCACGGATGACACGCAAGGGGCTTTCCACACGCCCCGCAAGGT
CATCTGCTTCGGCAACGTCCTGCTCGACCGACTAGTCCAGCTCGAGGATC
CCCAACTCCTGGAGCGGTTCGGCCTGGAACTGGGCTCCAAGGGTGAACTG
GACATGGAGAAACTCAACCAGCTGGCAGCGGAGGCTTCTGAGAGCTCTCG
GTGCCTTACAAACCCGGGTGGCTCTGCCCTCAACACTGCCCGCATCCTGA
AGCAGCTGGGCACAGACGCGCTCTTCTTTGGCGCCGTGGGAGCCGACAAG
CACGCCGAGGAGCTGCGCCAGATCATTCGGGATCGCGGCATCGAGGCCAG
GCTGCAGACCGTCGAGGATGCGCACACAGGGCAGTGCGTGTGCCTCATGT
ATCAGGACAACCCCACGCTGTACGCCAACATCGGCGCCTCGGCTCAGTTC
GAGGTGCAGACCCTGAGCCACGCCGTCAGCCACGAAGGCCAAAGCTTCCT
GCGACCGGTGGAGAGCAAGCAAATCCTGTACGTGA
MXO02255.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:37:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1851-PA | 1101 | Ady43A-RA | 1..576 | 9..584 | 2830 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:29:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ady43A-RA | 2203 | CG1851-RA | 476..1051 | 9..584 | 2850 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:29:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7244176..7244517 | 584..243 | 1680 | 99.4 | Minus |
| 2R | 25286936 | 2R | 7244988..7245143 | 244..89 | 780 | 100 | Minus |
| 2R | 25286936 | 2R | 7245221..7245301 | 89..9 | 405 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:29:23 has no hits.
MXO02255.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:51 Download gff for
MXO02255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1851-PA | 1..576 | 9..584 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:47 Download gff for
MXO02255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ady43A-RA | 470..1051 | 1..584 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:31 Download gff for
MXO02255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ady43A-RA | 470..1051 | 1..584 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:31 Download gff for
MXO02255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7244176..7244515 | 245..584 | 99 | <- | Minus |
| 2R | 7244988..7245143 | 89..244 | 100 | <- | Minus |
| 2R | 7245222..7245307 | 1..88 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:47 Download gff for
MXO02255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3131681..3132020 | 245..584 | 99 | <- | Minus |
| arm_2R | 3132493..3132648 | 89..244 | 100 | <- | Minus |
| arm_2R | 3132727..3132812 | 1..88 | 95 | | Minus |
