MXO02256.3prime Sequence
530 bp (527 high quality bases) assembled on 2007-01-19
> MXO02256.3prime
ATGGTCTAGAAAGCTTGCAGCCTCGCTCTTCTGCCGGTTCTGCATAACTT
GGCGCAGCTGAGGGAACGTGCTCTTCGTCTGCATTGGGTGCAGCCGGGCG
CAGAGCGTGGTGAATGGCTCGTAGAGGGAGGGACGCTCCATGGCGTTCAC
CGTGTAGTGCTTTATGCGCTCTCGCTGGCACCAGATGTTGGCGCGGTCCA
TGACCTTCTCGACGGGATTTGGGGCTGCTCGTGCCCTCACGTTGGCCAGC
ACCACAACGGGAATCTCCTTCTTCTCCTTGTGCTTCTCAATGTCAGCCTT
GATGTCGGCCAGCATGTCAAGGCTGCGCGGATCCATGGGATCGTAGACCA
GAACGAATGCATCTGGAAACTGAAGGTAGTGGCGTGGCAGCTGCTGCTGC
TCGCCCTGCAATCCGGCCGAGTCGTAGATGCGCAGGGTCTCTCGGGCTCC
GCCCCTGCCTGTATCCACGCTGGCCACGTAGATATCCTCAATGGTTGGAT
GCAGTTCCGTTTCGAGATTGACGTGGCCGT
MXO02256.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:38:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1669-PA | 606 | kappaB-Ras-RA | 92..603 | 530..19 | 2510 | 99.6 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:20:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30503-RB | 1842 | CG30503-RB | 189..700 | 530..19 | 2530 | 99.6 | Minus |
kappaB-Ras-RB | 1842 | CG1669-RB | 189..700 | 530..19 | 2530 | 99.6 | Minus |
kappaB-Ras-RC | 933 | CG1669-RC | 189..700 | 530..19 | 2530 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:20:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7445029..7445518 | 19..508 | 2435 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:20:27 has no hits.
MXO02256.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:51 Download gff for
MXO02256.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1669-PA | 92..606 | 18..530 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:57 Download gff for
MXO02256.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
kappaB-Ras-RA | 189..705 | 12..530 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:05:39 Download gff for
MXO02256.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
kappaB-Ras-RC | 189..705 | 12..530 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:05:39 Download gff for
MXO02256.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7445026..7445517 | 19..507 | 99 | <- | Plus |
2R | 7445582..7445604 | 508..530 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:57 Download gff for
MXO02256.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3332531..3333022 | 19..507 | 99 | <- | Plus |
arm_2R | 3333087..3333109 | 508..530 | 95 | | Plus |
MXO02256.5prime Sequence
627 bp (627 high quality bases) assembled on 2007-01-19
> MXO02256.5prime
CAGTCGACATGCTAAATGCCAAGATCGGGAAGGTCGGCAAGGTACTGGTG
TGCGGGATGAAGGGCGTGGGCAAGACGGCGCTGATAGAGCAGCTGGTCTA
CGGCCACGTCAATCCCGAAACGGAACTGCATCCAACCATTGAGGATATCT
ACGTGGCCAGCGTGGATACAGGCAGGGGCGGAGCCCGAGAGACCCTGCGC
ATCTACGACACGGCCGGATTGCAGGGCGAGCAGCAGCAGCTGCCACGCCA
CTACCTTCAGTTTCCAGATGCATTCGTTCTGGTCTACGATCCCATGGATC
CGCGCAGCCTTGACATGCTGGCCGACATCAAGGCTGACATTGAGAAGCAC
AAGGAGAAGAAGGAGATTCCCGTTGTGGTGCTGGCCAACGTGAGGGCACG
AGCAGCCCCAAATCCCGTCGAGAAGGTCATGGACCGCGCCAACATCTGGT
GCCAGCGAGAGCGCATAAAGCACTACACGGTGAACGCCATGGAGCGTCCC
TCCCTCTACGAGCCATTCACCACGCTCTGCGCCCGGCTGCACCCAATGCA
GACGAAGAGCACGTTCCCTCAGCTGCGCCAAGTTATGCAGAACCGGCAGA
AGAGCGAGGCTGCAAGCTTTCTAGACC
MXO02256.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:38:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1669-PA | 606 | kappaB-Ras-RA | 1..603 | 9..611 | 3015 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30503-RB | 1842 | CG30503-RB | 98..700 | 9..611 | 3015 | 100 | Plus |
kappaB-Ras-RB | 1842 | CG1669-RB | 98..700 | 9..611 | 3015 | 100 | Plus |
kappaB-Ras-RC | 933 | CG1669-RC | 98..700 | 9..611 | 3015 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7445029..7445518 | 611..122 | 2450 | 100 | Minus |
2R | 25286936 | 2R | 7445581..7445695 | 123..9 | 575 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:15:59 has no hits.
MXO02256.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:51 Download gff for
MXO02256.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1669-PA | 1..606 | 9..612 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:33:11 Download gff for
MXO02256.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
kappaB-Ras-RA | 98..705 | 9..618 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:43 Download gff for
MXO02256.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
kappaB-Ras-RC | 98..705 | 9..618 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:43 Download gff for
MXO02256.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7445026..7445517 | 123..611 | 99 | <- | Minus |
2R | 7445582..7445695 | 9..122 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:33:11 Download gff for
MXO02256.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3332531..3333022 | 123..611 | 99 | <- | Minus |
arm_2R | 3333087..3333200 | 9..122 | 100 | | Minus |