MXO02258.5prime Sequence
522 bp (521 high quality bases) assembled on 2007-01-19
> MXO02258.5prime
CAGTCGACATGGCTCCTAAGAAGCATAGTGGGTTTATGATGTTCGTAAAC
GAGTGGAGAAACCGGAACGCCGAGGGCCGACGCATGACGCTGGCGCAGGC
TGTTTCCCACTGCGGCACCATATGGGAGAAAATGAACACCCAGCAGCGTG
GTCCGTACAACTCAGGCGGCAAGGACGCAAATGTGGCGCAACGCGCCAAA
AGGGAAAGTTCCAACGGCCACGGCCAGGTGGACAAGGCCCAAAGGGAGGC
CACCGAGAGCTTGATGGACATGAAACGTACCATCGAGCGCCTCGTGCTAA
ACGCCAAGATGTCCCATGATCTGGAGAATGCCAAGTTTGTCTTCGTTGCC
TTCAACTACTTCACTAAAGCCTTGACCACCGACGTCTATGTGCCCGCCGA
GTTTGCGGCATGCGAATATTCGTTGAAGGAGGGAATCCGATCCATCTACA
GCACCATGATTGACCCCGGTCAGATCATTTTTGGGCAAGGTAGCGATGCC
CTGCTTCCTCTTCACCACTCAC
MXO02258.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:38:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11254-PA | 1380 | mael-RA | 1..516 | 9..522 | 2500 | 99.6 | Plus |
CG11254-PB | 1380 | mael-RB | 1..516 | 9..522 | 2500 | 99.6 | Plus |
CG11254-PC | 1389 | mael-RC | 128..525 | 127..522 | 1910 | 99.4 | Plus |
CG11254-PC | 1389 | mael-RC | 1..120 | 9..128 | 600 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:46:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mael-RD | 2143 | CG11254-RD | 647..1162 | 9..522 | 2530 | 99.6 | Plus |
mael-RB | 1830 | CG11254-RB | 334..849 | 9..522 | 2530 | 99.6 | Plus |
mael-RA | 1759 | CG11254-RA | 263..778 | 9..522 | 2530 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:46:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22724738..22724929 | 127..318 | 960 | 100 | Plus |
3L | 28110227 | 3L | 22724985..22725174 | 318..507 | 950 | 100 | Plus |
3L | 28110227 | 3L | 22724566..22724685 | 9..128 | 600 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 18:46:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
invader1 | 4032 | invader1 INVADER 4032bp | 379..406 | 522..495 | 113 | 89.3 | Minus |
invader1 | 4032 | invader1 INVADER 4032bp | 3988..4015 | 522..495 | 113 | 89.3 | Minus |
MXO02258.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:52 Download gff for
MXO02258.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11254-PB | 1..516 | 9..522 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:25 Download gff for
MXO02258.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mael-RA | 255..778 | 1..522 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:06 Download gff for
MXO02258.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mael-RA | 255..778 | 1..522 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:06 Download gff for
MXO02258.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22724558..22724685 | 1..128 | 96 | -> | Plus |
3L | 22724740..22724929 | 129..318 | 100 | -> | Plus |
3L | 22724986..22725191 | 319..522 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:25 Download gff for
MXO02258.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22718086..22718291 | 319..522 | 99 | | Plus |
arm_3L | 22717840..22718029 | 129..318 | 100 | -> | Plus |
arm_3L | 22717658..22717785 | 1..128 | 96 | -> | Plus |